glycoinformatics

Glycan Analysis and Glycoinformatics Library for Python

Framework for the rapid modeling glycans and glycoproteins.

A Python framework for the rapid modeling of glycans

GlyContact: a Python package for retrieving, processing, and analyzing 3D glycan structures.

A PyMOL plugin for construction, visualization and analysis of glycan molecules. https://www.ncbi.nlm.nih.gov/pubmed/27549814

Conformation clustering algorithm for glycans MD conformers for GlycoShape

Easy Install and Load the `Glycoverse`

Representation for glycan structures in R.

An ontology module describing molecular glyco-phenotypes

The JavaScript widget used to visualize the relationship among them

A software library and command-line tool for investigating and working with linear code representations of glycans and regular-expression-like operators.

Extract glycan motifs from `glyrepr` glycan structures.

glycan array analysis

Find glycopeptide peptide sequences in protein FASTA files.

Artifact-aware, FDR-controlled glycan assignment for released-glycan LC-MS, benchmarked across public glycomics data (in development)

A Python toolkit for enumerating glycan tree topologies from sugar compositions and generating GWS/MSP libraries with SNFG visualization.

Reproducible glycoinformatics pipeline for automated machine learning experiments

Generate proteoforms from a list of glycopeptides.

Glycan structure regex operations.