Some useful RDKit functions
Official git repository for Biopython (originally converted from CVS)
A project (and object) for storing, manipulating, and converting molecular mechanics data.
A comprehensive library for computational molecular biology
The Chemistry Development Kit
The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.
A dependency-free cross-platform swiss army knife for PDB files.
A Python library for structural cheminformatics
macromolecular crystallography library and utilities
MoleculeKit: Your favorite molecule manipulation kit
Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtools, bcftools, and tabix.
Molecular Processing Made Easy.
bedtools - the swiss army knife for genome arithmetic
Source code for molecular graphics program UCSF ChimeraX
Web-based molecule sketcher
ChEMBL database structure pipelines
Library for reading and writing chemistry files
C library for high-throughput sequencing data formats
Avogadro is an advanced molecular editor designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science, and related areas.
Parsers and algorithms for computational chemistry logfiles
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