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Pull requests: scverse/anndata

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Pull requests list

test(backed): add regression for filename=None after read_h5ad
#2517 opened Jun 27, 2026 by SID-6921 Loading…
2
feat: make obs/var backend-agnostic with a DataFrameLike contract
#2516 opened Jun 26, 2026 by srivarra Contributor Loading…
2 of 6 tasks
1
1
perf: speed up backed sparse integer indexing
#2506 opened Jun 17, 2026 by tippered1-debug Loading…
1 of 3 tasks
2
perf: avoid redundant sorting in h5py indexing skip-gpu-ci
#2496 opened Jun 13, 2026 by tippered1-debug Loading…
1 of 3 tasks
0.12.18
6
implemented multi-threading for h5ad file reads, substantial speed up (rivals zarr + zarrs)
#2471 opened May 28, 2026 by zboldyga Loading…
2 tasks
6
test: add Dask chunk grid benchmark scaffold performance 🐌 skip-gpu-ci type: dask array
#2465 opened May 21, 2026 by ehsanestaji • Draft 0.12.18
4
Fix raw X when leaving backed mode skip-gpu-ci
#2460 opened May 19, 2026 by ehsanestaji • Draft
2 of 3 tasks
0.12.18
1
1
feat: aligned_axis_key_join for on-axis key joining skip-gpu-ci
#2416 opened May 3, 2026 by Ekin-Kahraman Loading…
1
8
feat(utils): expose STANDARD_SECTIONS as the canonical section order
#2402 opened Apr 21, 2026 by katosh Contributor Loading…
3 tasks done
1
1
Removed scheduler from da.store as this works regardless of scheduler
#2376 opened Mar 25, 2026 by joshua-gould Contributor Loading…
1
Enable write to existing zarr store
#2366 opened Mar 16, 2026 by joshua-gould Contributor Loading…
2
Replace use_cuda with device parameter in AnnLoader
#2360 opened Mar 9, 2026 by LiudengZhang Contributor Loading…
4 tasks done
7
feat: "backed" mode for read_lazy
#2357 opened Feb 27, 2026 by ilan-gold Contributor • Draft
8 tasks
1
1
feat: mlx compat
#2334 opened Feb 6, 2026 by ilan-gold Contributor • Draft
2 of 5 tasks
0.13.0
1
feat: DataFrame API for custom obs and var skip-gpu-ci
#2328 opened Feb 4, 2026 by ilan-gold Contributor • Draft
2 of 8 tasks
0.13.0
2
7
feat: add LazyCategoricalDtype for lazy categorical columns
#2288 opened Jan 8, 2026 by katosh Contributor Loading…
3 tasks done
1
41
feat: allow reading nullable arrays without mask on disk
#2279 opened Jan 5, 2026 by flying-sheep Member • Draft
3 tasks
0.13.0
1
chore: upgrade to cupy-cuda13
#2269 opened Dec 30, 2025 by ilan-gold Contributor Loading…
3 tasks
0.13.0
1
feat: Add HTML representation
#2236 opened Nov 29, 2025 by katosh Contributor Loading…
2 of 3 tasks
0.13.0
1
40
chore: add type annotation
#2229 opened Nov 19, 2025 by szabgab Contributor Loading…
1
ci: use codecov flags
#2217 opened Nov 11, 2025 by flying-sheep Member • Draft 0.12.18
1
Pa/name-conventions
#2208 opened Nov 6, 2025 by flying-sheep Member • Draft
3 tasks
1
feat: create parent dirs when writing into h5ad
#2186 opened Oct 30, 2025 by marcfranquesa Loading…
3
Add type-checking
#2174 opened Oct 25, 2025 by szabgab Contributor Loading…
3 tasks done
19
Add batch_converter hook + multiprocessing support to experimental.pytorch.AnnLoader
#2135 opened Sep 29, 2025 by ronamit Loading…
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