Skip to content

@CellMigrationLab Cell Migration Lab

Change the repository type filter

All

    Repositories list

    30 repositories

    • Auto_Labmeeting

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Apr 21, 2026Apr 21, 2026

    • LabConstrictor

      Public template
      From Jupyter Notebook to Desktop App in One Click
      Jupyter Notebook
      •
      MIT License
      •0•11•2•0•Updated Apr 17, 2026Apr 17, 2026

    • LabConstrictor_Demo

      Public
      A demo repository showcasing the possibilities of LabConstrictor
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Apr 17, 2026Apr 17, 2026

    • docs-hub

      Public
      CellMigrationLab global documentation and shared guides.
      MIT License
      •0•0•0•0•Updated Apr 16, 2026Apr 16, 2026

    • LabConstrictor_streamlit

      Public
      Python
      •
      MIT License
      •1•0•0•0•Updated Apr 16, 2026Apr 16, 2026

    • Datasets

      Public
      List of openly available dataset generated by our lab
      MIT License
      •0•13•0•0•Updated Apr 1, 2026Apr 1, 2026

    • beautifulmaps

      Public
      This repository contains the original Jupyter notebook to generate a high-resolution, print-ready city map with selected landmarks highlighted.
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Mar 30, 2026Mar 30, 2026

    • .github

      Public
      1•0•0•0•Updated Mar 16, 2026Mar 16, 2026

    • zebrafish-FDM-molds

      Public
      3D printed FDM molds for zebrafish imaging experiments; design files and instructions.
      G-code
      •
      MIT License
      •0•3•0•0•Updated Feb 24, 2026Feb 24, 2026

    • LabChronicle_streamlit

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Feb 18, 2026Feb 18, 2026

    • LabRecipes

      Public
      A collection of protocols for human consumption.
      1•0•0•1•Updated Feb 10, 2026Feb 10, 2026

    • CellTracksColab

      Public
      A platform for compiling, analyzing, and exploring tracking data
      Jupyter Notebook
      •
      MIT License
      •4•50•6•1•Updated Feb 2, 2026Feb 2, 2026

    • AdhesionFlowSimulator

      Public
      AdhesionFlowSimulator models cell adhesion dynamics under flow, simulating interactions between cells and surfaces. It allows for the analysis of cell attachmen…
      Jupyter Notebook
      •0•0•0•0•Updated Jan 9, 2026Jan 9, 2026

    • PDAC_DL

      Public
      GitHub page associated with the publication "Fast label-free live imaging with FlowVision reveals key principles of cancer cell arrest on endothelial monolayers…
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •1•3•0•0•Updated Jan 9, 2026Jan 9, 2026

    • jl-hidecode

      Public
      A Jupyter Lab extension that allows hiding and showing the code in the same format as Google Colab.
      TypeScript
      •
      BSD 3-Clause "New" or "Revised" License
      •1•2•0•0•Updated Dec 15, 2025Dec 15, 2025

    • FUCCI

      Public
      FUCCI analysis pipeline
      Jupyter Notebook
      •0•0•0•0•Updated Aug 27, 2025Aug 27, 2025

    • rxiv-maker

      Public template
      Python
      •
      MIT License
      •5•0•0•0•Updated Aug 24, 2025Aug 24, 2025

    • PIV_4_xCELLigence

      Public
      PIV analysis for xCELLigence timelapse image data
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Aug 12, 2025Aug 12, 2025

    • slack_todo_repo

      Public template
      Python
      •
      MIT License
      •1•0•0•1•Updated Jul 29, 2025Jul 29, 2025

    • I2K_2024

      Public
      I2K 2024 workshop materials for "Object Tracking and track analysis using TrackMate and CellTracksColab"
      GNU General Public License v3.0
      •0•4•0•0•Updated Jul 1, 2025Jul 1, 2025

    • Plot-Stats

      Public
      Jupiter notebooks created to help us plot and analyse our datasets
      Jupyter Notebook
      •
      MIT License
      •1•4•2•0•Updated Apr 25, 2025Apr 25, 2025

    • Fast4DReg

      Public
      Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/or z-directions.
      Java
      •
      MIT License
      •5•40•1•0•Updated Apr 21, 2025Apr 21, 2025

    • V4SDB_Winter_School_2025

      Public
      Training materials for V4SDB Student Winter School, 28th-31st January 2025 at ELTE Eötvös Loránd University in Budapest, Hungary
      MIT License
      •0•1•0•0•Updated Jan 30, 2025Jan 30, 2025

    • Course-Image-analysis-2024

      Public
      Creative Commons Attribution 4.0 International
      •0•0•0•0•Updated Oct 31, 2024Oct 31, 2024

    • celltrackscolab-viewer

      Public
      A simple Napari plugin to visualize tracks stored in the CellTracksColab format
      Python
      •
      MIT License
      •0•1•0•0•Updated Sep 9, 2024Sep 9, 2024

    • GithubToText

      Public
      Code to automatically copy a chosen Github repo into a text file
      Jupyter Notebook
      •
      MIT License
      •0•1•0•0•Updated Sep 2, 2024Sep 2, 2024

    • Fiji_macros

      Public
      A small collection of useful macro for Fiji
      ImageJ Macro
      •
      MIT License
      •1•1•0•0•Updated Aug 27, 2024Aug 27, 2024

    • FiloMAP

      Public
      ImageJ and R scripts used to map the localisation of proteins whithin filopodia and generate filopodia maps.
      R
      •
      MIT License
      •0•4•0•0•Updated May 28, 2024May 28, 2024

    • FiloQuant

      Public
      Filopodia quantification plugin for ImageJ
      ImageJ Macro
      •
      MIT License
      •0•2•0•0•Updated May 28, 2024May 28, 2024

    • ModelZoo

      Public
      A web page listing our publicly available Deep Learning training datasets and models
      MIT License
      •0•1•0•0•Updated Jan 28, 2024Jan 28, 2024
    ProTip! When viewing an organization's repositories, you can use the props. filter to filter by custom property.