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Update genomes.yml#40

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jennaj wants to merge 2 commits into
mainfrom
jennaj-danRer11-2
Open

Update genomes.yml#40
jennaj wants to merge 2 commits into
mainfrom
jennaj-danRer11-2

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@jennaj

@jennaj jennaj commented Feb 28, 2024

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May 2017 (GRCz11/danRer11)

@jennaj
jennaj requested a review from natefoo February 28, 2024 16:12
@natefoo

natefoo commented Feb 28, 2024

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@galaxybot deploy this

jennaj and others added 2 commits February 28, 2024 12:49
May 2017 (GRCz11/danRer11)
@natefoo

natefoo commented Feb 28, 2024

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@galaxybot deploy this

@natefoo

natefoo commented Feb 28, 2024

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Well that's interesting...

Dispatched job 1. Running DM: "data_manager_fetch_genome_all_fasta_dbkey" with parameters: {'dbkey_source': {'dbkey': 'danRer11', 'dbkey_source_selector': 'new'}, 'reference_source': {'reference_source_selector': 'ucsc', 'requested_dbkey': 'danRer11'}, 'sequence_id': 'danRer11', 'sequence_name': 'Zebrafish May 2017 (GRCz11/danRer11)'}
Job 1 finished with state error.
Job 1: Tool 'data_manager_fetch_genome_all_fasta_dbkey' finished with exit code: 1. Stderr: Traceback (most recent call last):
  File "/cvmfs/main.galaxyproject.org/shed_tools/toolshed.g2.bx.psu.edu/repos/devteam/data_manager_fetch_genome_dbkeys_all_fasta/4d3eff1bc421/data_manager_fetch_genome_dbkeys_all_fasta/data_manager/data_manager_fetch_genome_all_fasta_dbkeys.py", line 497, in <module>
    main()
  File "/cvmfs/main.galaxyproject.org/shed_tools/toolshed.g2.bx.psu.edu/repos/devteam/data_manager_fetch_genome_dbkeys_all_fasta/4d3eff1bc421/data_manager_fetch_genome_dbkeys_all_fasta/data_manager/data_manager_fetch_genome_all_fasta_dbkeys.py", line 464, in main
    raise Exception('"%s" is not a valid dbkey. You must specify a valid dbkey.' % (dbkey))
Exception: "?" is not a valid dbkey. You must specify a valid dbkey.

@natefoo

natefoo commented Feb 29, 2024

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@galaxybot deploy this

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