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Master_vcf terminated for single-sample run

Status: Open.

#42 In dsarov/ARDaP;

· mh-tan opened on Mar 2, 2026

CARD db updates

Status: Open.

#40 In dsarov/ARDaP;

· dr-joe-wirth opened on Jun 27, 2025

Error submitting process

Status: Open.

#38 In dsarov/ARDaP;

· wangzhiwei-sd opened on Mar 11, 2025

Fastree2 appears to not create phylogeny in latest version

bug

Status: Open.

#37 In dsarov/ARDaP;

· dsarov opened on Jul 24, 2024

Fix renaming in trimmomatic step

bug

Status: Open.

#36 In dsarov/ARDaP;

· dsarov opened on Jul 24, 2024

feature request: fast test data (config file)

Status: Open.

#31 In dsarov/ARDaP;

· chrisgulvik opened on Oct 28, 2023

Add processing of single end reads

enhancement

Status: Open.

#30 In dsarov/ARDaP;

· dsarov opened on Mar 8, 2022

Reduce no of job requests

enhancement

Status: Open.

#26 In dsarov/ARDaP;

· dsarov opened on May 13, 2021

Annotated vcfs are also output into the VCFs output folder

bug

Status: Open.

#25 In dsarov/ARDaP;

· dsarov opened on May 12, 2021

Assemblies misbehaving when period/full stop included in file name

bug

Status: Open.

#24 In dsarov/ARDaP;

· dsarov opened on May 12, 2021

GWAS generation script

enhancement

Status: Open.

#23 In dsarov/ARDaP;

· dsarov opened on May 12, 2021

Assemblies won't run by themselves

enhancement

Status: Open.

#22 In dsarov/ARDaP;

· dsarov opened on May 12, 2021