Making code Dockstore compatible#3

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Jeltje wants to merge 7 commits into

OpenGenomics:masterfrom

Commits on Feb 21, 2017

added current samtools to docker container because the somatic sniper internal version does not like long fasta lines when doing faidx; added option to input a gzipped genome to SomaticSniper.py; u…
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Commits on Feb 22, 2017

adding test file with public data
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Commits on Feb 23, 2017

changed docker image to quay.io
Jeltje
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Commits on Feb 24, 2017

renamed test json
Jeltje
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Commits on Mar 1, 2017

changed gunzip to zcat to avoid memory issues with larger files
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Commits on Apr 4, 2017