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Implements attempt-aware resource scaling for heavy Snakemake rules, updates the wrapper to pass rule resources through to Slurm, and fixes dry-run failure handling so a failed dry-run does not report success. Closes #127. <sub>⚡ Generated using AI ⚡</sub>
Summarize the attempt-aware resource scaling and dry-run fix in the development changelog. ⚡ Generated using AI ⚡
Update the changelog and user docs to explain how baseline cluster.json resources interact with retry-based resources.gres scaling. ⚡ Generated using AI ⚡
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# Conflicts: # CHANGELOG.md # aspen
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Changes
Implements attempt-aware resource scaling for heavy Snakemake rules, updates the wrapper to pass rule resources through to Slurm, and documents how baseline
cluster.jsonresources interact with retry-basedresources.gresscaling. It also fixes dry-run failure handling so a failed dry-run does not report success.Issues
Closes #127.
PR Checklist
(
Strikethroughany points that are not applicable.)CHANGELOG.mdwith a short description of any user-facing changes and reference the PR number. Guidelines: https://keepachangelog.com/en/1.1.0/