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1. sample-flow-prefect sample-flow-prefect Public

   Prefect-based data pipeline for multi-source ingestion, validation, runtime metrics, and reporting

   Python

2. target-qc-nextflow target-qc-nextflow Public

   Nextflow DSL2 pipeline for design generation, scoring, QC metrics, and HTML reporting

   Python

3. single-cell-spatial-analysis single-cell-spatial-analysis Public

   Notebook-based workflow for single-cell and spatial transcriptomics analysis, including signature derivation, spatial scoring, and region-level summarisation

   Jupyter Notebook

4. single-cell-clustering-analysis single-cell-clustering-analysis Public

   A structured single-cell RNA-seq analysis workflow including clustering, annotation, and biological interpretation.

   Jupyter Notebook