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tutorial_heudiconv_singularity

a naive tutorial about how to convert heudiconv docker image to singularity image, and how to use singularity version of heudiconv to convert dicom files to BIDS files

introduction

this tutorial was mainly create for running fMRI data preprocessing on Cluster, which only takes singularity container.

I'd like to express my sincere thanks to the authors of heudiconv (https://github.com/nipy/heudiconv) and docker2singularity (https://github.com/singularityhub/docker2singularity)!

the tutorial is heudiconv_singularity_conv2bids.md and here's also one Chinese version: chineseVer_HPC使用singularity版heudiconv进行bids转换.md

the content should be almost the same.

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a naive tutorial about how to convert heudiconv docker image to singularity image, and how to use singularity version of heudiconv to convert dicom files to BIDS files

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