CNV-robust phasing, DBSCAN strategy, and expansion-sensitivity QC flags#17

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fix/cnv-robust-haplotype-threshold

Jun 23, 2026

Commits on Jun 4, 2026

fix: cap haplotype cluster-size threshold by --support (CNV-robust)

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fix: seed downsampling RNG for deterministic consensus

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feat: optional DBSCAN phasing strategy (--phasing-strategy dbscan)

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log: print the full parsed arguments at startup

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tune: DBSCAN defaults to eps=0.4, length_weight=0.3

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docs: document --phasing-strategy / DBSCAN options and NCLUSTERS

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Commits on Jun 14, 2026

style: rustfmt the seeded single-read consensus selection

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Commits on Jun 23, 2026

feat: expansion/imprecision QC flags, MRL field, and --phasing both

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