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add ability to specify delimiter for CSV inputs#44

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aidanlabella wants to merge 50 commits intomainfrom
aidan/brown-EEPS-DATA-1720-prj
Open

add ability to specify delimiter for CSV inputs#44
aidanlabella wants to merge 50 commits intomainfrom
aidan/brown-EEPS-DATA-1720-prj

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@aidanlabella
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@aidanlabella aidanlabella commented Apr 4, 2024

Describe your changes

Added support for other delimiters besides ',' in CSV files fed into EXAMM. This is especially useful when the input data has other delimiters such as tabs (which is really a TSV file) or semicolons.

What type is this change?

  • Bug fix
  • New feature

Checklist before requesting a review

  • My code follows the style guidelines of this project
  • [] I have tested on MAC OS system
  • I have tested on Arch Linux system
  • I have tested on the RIT research cluster and updated the spack packages for compiling
  • My changes generate no new warnings
  • If the PR is related to a new feature, I added the running scripts for the new feature

How Has This Been Tested?

Evolved genomes on the UCI air quality dataset which uses semicolons as delimiters.

@aidanlabella aidanlabella requested a review from jkarns275 April 4, 2024 00:09
@jkarns275
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Code looks good about to test it on my computer + the cluster

@jkarns275
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also, install clang-format w/ brew and run the script scripts/util/format.sh to pass the checks.

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2 participants