AMR prediction pipeline for Acinetobacter baumannii using whole-genome sequencing and machine learning (Random Forest, Logistic Regression) with SHAP-based gene importance analysis.
machine-learning logistic-regression feature-engineering genome-analysis antibiotics random-forest-classifier bacterial-genomes antimicrobial-resistance shap genome-features amrfinderplus resistance-phenotype
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Updated
May 22, 2026 - Jupyter Notebook