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microbiome-datasets

Here are 4 public repositories matching this topic...

microbiome / microbiomeDataSets

Experiment Hub based microbiome datasets

bioconductor microbiome microbiome-datasets experiment-hub

Updated Sep 21, 2024
R

Silverman-Lab / mutt

Public absolute abundance microbial sequencing data, hosted by The Silverman Lab

api data-repository microbiome-datasets sequencing-data absolute-abundances scale-reliant-inference total-microbial-load

Updated Sep 13, 2026
R

earmingol / Microbiome-Factorization

Examples of using PhyloFactor and DEICODE to analyze microbiome datasets.

machine-learning factorization microbiome microbiome-datasets factorization-methods

Updated Jun 16, 2019
Jupyter Notebook

sacci / american-gut-to-csv

Convert the American Gut Microbiome Project phenotype .xml files into a single .csv file.

csv-converter xml-parsing phenotyping microbiome microbiome-analysis microbiome-data microbiome-datasets

Updated Nov 24, 2020
Python

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