This repository contains a python script that (a) annotates MMEJ reads on the CRISPResso outputs, (b) converts CRISPResso Allele_Frequency_Table to variant tables that could be analysed using RIMA. Also, RIMA excel workbook is updated to allow execution on both Mac and Win systems.
Quantify CRISPR-Cas9 knockout editing from Nanopore (Plasmidsaurus) amplicon sequencing — a CRISPResso2 workflow with extra tools for multi-guide inter-cut dropouts and large excisions.
Add a description, image, and links to the crispresso2 topic page so that developers can more easily learn about it.
To associate your repository with the crispresso2 topic, visit your repo's landing page and select "manage topics."