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bacterial-secretion

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Qasim-Hussain-Code / bacterial_secretion_systems_identification

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A computational pipeline leveraging HMM-based probabilistic modeling to systematically identify, annotate, and map bacterial macromolecular secretion systems, conjugative transfer machineries, and CRISPR-Cas arrays across Bacteroidales proteomes.

computational-biology bioinformatics-pipeline comparative-genomics functional-genomics crispr-cas profile-hmm structural-annotation macsyfinder macromolecular-secretion-systems bacterial-secretion proteome-analysis
  • Updated Apr 7, 2026
  • Python

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