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[Nextclade] automated clade-defining mutation extraction script#21

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xonq wants to merge 13 commits into
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kzm-nextclade-dev
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[Nextclade] automated clade-defining mutation extraction script#21
xonq wants to merge 13 commits into
mainfrom
kzm-nextclade-dev

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@xonq

@xonq xonq commented May 22, 2025

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Nextclade relies on identifying clade-defining mutations to genotype. extract_nextclades.py outputs clade-defining mutations that enable Nextclade's genotyping module, which is used for Augur clades

@xonq xonq requested a review from a team as a code owner May 22, 2025 21:54
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