Merge dev into master#32
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…/linux Fix ONNX path conversion for non-Windows builds
Add unit tests for MetricCalculatorLogic command building
…t-images Add `rigid` subcommand for rigid-only alignment
Add Docker core build environment
Enable iterative rigid alignment
…-fedora-7.2 Add legacy glibc-compatible Linux build path
Added publication details for new research papers in the README.
[codex] Optimize rigid iterative processing
Integrate dev branch features into master after testing, resolving conflicts in CI workflow, README, conanfile, gitignore, and rigid.onnx. Co-authored-by: Cursor <cursoragent@cursor.com>
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Summary
devintomasterafter testing, bringing in the v4.2.x core refactor, iterative rigid alignment, BIDS batch support, Docker build environment, and legacy glibc Linux build path.rigid.onnx.CITATION.cff.Conflict resolution notes
.github/workflows/cross-compile.yml: kept dev's tag-only packaging guards for release artifacts.README.md: merged dev's NeuroImage publication updates and implemented metric docs; kept master content where compatible.localizer/src/conanfile.py: kept dev version (4.2.3-alpha) and combined hwloc workaround comments.rigid.onnx: kept dev's updated model..gitignore: kept both master template notebook ignores and dev.codexignore.Test plan
--versionand CLI help after mergeMade with Cursor