[Conformal EEG] Fix TUEV dataset metadata permissions for shared cluster storage #786
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oops, I accidentally used my other unresolved pr branch (#781) for this pr as well. hence, all the extraneous files and commits on this pr. to see the exact code for this pr only just look at this commit: "Fix TUEV metadata to use cache directory for permissions" |
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actually to make it easier I'll just create a new one so you can judge the two pr's separately with no conflict. |
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Author: Arjun Chatterjee (arjunc4@illinois.edu)
Contribution Type: Bug Fix
Fix TUEV dataset metadata permissions for shared cluster storage.
Modified prepare_metadata() to write metadata CSVs to ~/.cache/pyhealth/tuev/
as fallback when data directory is not writable. Updated init() to check
both shared and cache locations for CSVs. This resolves PermissionError when
users lack write access to shared data directories on clusters.
Tested on SunLab cluster with both tuev_conventional_conformal.py and
tuev_covariate_shift_conformal.py - processed 370 patients (113,353 samples)
successfully without permission errors.