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Remove two submodules - #206

Merged

spossann merged 54 commits into

develfrom

remove-two-submodules

Mar 20, 2026

Merged

Remove two submodules#206
spossann merged 54 commits into
develfrom
remove-two-submodules

Commits on Mar 13, 2026
- re-add tutorials to doc
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  700fbb1
- add jupyter kernel for Stefans machine; improve tutorials a bit
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  35f7180
- new folder examples/ (content copied from struphy-parameter-files)
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- remove the two submodules
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  5acdc48
Commits on Mar 16, 2026
- change paths in submod tests
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  3bd5c5d
- - New regression tests: test all params_*.py files in examples folder
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- actually add new module test_regression.py
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  d2769db
- Merge branch 'devel' into remove-two-submodules
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  f8c94a1
- fomratting
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  13135c9
- fix paths and rmtree
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  1735832
- remove f-strings in examples for ruff
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  81c3a16
- use image from ghcr for regression and tutorials testing
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  c3c6323
- add container
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  289ed7e
- new action folder-diff
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  bf253f7
- adapt folder-diff
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  8008c37
- use testmon in regressiona and tutorial tests
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  0a46743
- rename regression and tutorial workflows
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- add container to tutorials test
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  5f44dff
- adapt on:
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  a2cc366
- source the env
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  6803d72
- use sphinx-collections to build tutorials from new folder tutorials/ outside of doc/
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- add to .gitignore
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  75cf508
Commits on Mar 17, 2026
- install OSMesa/EGL in tutorial test
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  f1e0c46
- add argument one_time_step to Simulation.run() for testing
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  974f0d2
- remove f-string
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  7e13842
- fix mpi race condition in pproc of examples
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  21ca3b7
- remove sudo
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  4d550e0
- rename regression -> examples
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  302ff67
- rename workflow
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  a56d39a
- try PR inot struphy-parameter-files from workflow
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  b87c7f6
- push new branch first
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  abe524f
- checkout paramater repo
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  6154f7d
- use new fine-grained access token
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  5db2d4e
- use needs so that branch exists before creating PR
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  2a81e11
- try branch-suffix
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  b3ae5e7
- use gh cli to create the pr
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  e8488f8
- remove flase flag
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  a24f886
- use submod-diff
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  57abbad
- change path
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  5ec6d5f
- reomve path struphy/
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  140095b
- create PR for tutorials
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  563c8c6
- cretae pr into tutorials on: push to main
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  9973bd5
Commits on Mar 18, 2026
- Merge branch 'devel' into remove-two-submodules
  spossann
  authored
  87563c2
Commits on Mar 20, 2026
- Update src/struphy/io/setup.py
  
  spossann
  and
  Copilot
  authored
  1df861d
- Update doc/sections/tutorials.rst
  
  spossann
  and
  Copilot
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  2ed370b
- Update tutorials/tutorial_02_parameter_files.ipynb
  
  spossann
  and
  Copilot
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  7436039
- Update tutorials/tutorial_03_test_particles.ipynb
  
  spossann
  and
  Copilot
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  e854902
- Update tutorials/tutorial_03_test_particles.ipynb
  
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  and
  Copilot
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  c4eaa6e
- fix typos in tutorials
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  920db7d
- add Struphy version number to PR title of auto-generated PR
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  f0732eb
- move new code to an action
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  b80ccf6
- remove if: env.SUBMOD_CHANGED == true for parameters
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  82d4e48
- remove all tutorials before copying
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  dd9d95d
- temporarily add the bound jax-finufft<=1.2.0 until desc has a new release
  spossann
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  f9c4355

Commits

Commits on Mar 13, 2026

Commits on Mar 16, 2026

Commits on Mar 17, 2026

Commits on Mar 18, 2026

Commits on Mar 20, 2026