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v3.2.0

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@yangchoo yangchoo released this 21 May 22:34
· 328 commits to master since this release
v3.2.0
52105d2

Summary

There has been a number of updates since the last major release (v3.0.0) covering additions to the API, changes to analysis objects as well as other misc. fixes.

On the CLI front, tab completion can now be enabled by sourcing transcriptic_complete.sh. Detailed instructions can be found in README.md. Also, the -h flag now prints help.

On the analysis front, the Instruction and Aliquot objects have been reworked. All the objects listed in the documentation are now stable and have complete functionality.

Changelog (since v3.0.0)

Added

  • Tab completion for CLI (enabled by sourcing transcriptic_complete.sh)
  • Made -h option synonymous with --help
  • New API route for getting dataset zipfiles: api.get_zip

Changed

  • Reworked Instruction object
  • Reworked Run.instructions to return a DataFrame of Instruction objects
  • Aliquot object has been reworked into Container object as an aliquots property

Fixed

  • Better handling of Datasets with no well_map property in kinetics.spectrophotometry
  • Change check for ImagePlate to be more generic

Removed

  • Resource object has been removed from the library as its currently unused
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