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Add tiling QC metric for tile-boundary segmentation artifacts#1157

Merged
timtreis merged 31 commits into
mainfrom
feature/tiling-qc-v2
May 26, 2026
Merged

Add tiling QC metric for tile-boundary segmentation artifacts#1157
timtreis merged 31 commits into
mainfrom
feature/tiling-qc-v2

Fix doc cross-references in tiling QC docstrings

9c36d3b
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Codecov / codecov/project succeeded May 26, 2026 in 0s

73.18% (target 1.00%)

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73.18% (target 1.00%)

Details

Codecov Report

❌ Patch coverage is 62.91391% with 168 lines in your changes missing coverage. Please review.
✅ Project coverage is 73.18%. Comparing base (67b2c74) to head (9c36d3b).

Files with missing lines Patch % Lines
src/squidpy/experimental/tl/_tiling_qc.py 64.88% 74 Missing and 18 partials ⚠️
src/squidpy/experimental/im/_tiling.py 59.39% 56 Missing and 11 partials ⚠️
src/squidpy/experimental/pl/_tiling_qc.py 64.70% 3 Missing and 3 partials ⚠️
src/squidpy/_utils.py 66.66% 3 Missing ⚠️
Additional details and impacted files
@@            Coverage Diff             @@
##             main    #1157      +/-   ##
==========================================
- Coverage   73.82%   73.18%   -0.64%     
==========================================
  Files          45       48       +3     
  Lines        7013     7463     +450     
  Branches     1188     1265      +77     
==========================================
+ Hits         5177     5462     +285     
- Misses       1349     1483     +134     
- Partials      487      518      +31     
Files with missing lines Coverage Δ
src/squidpy/_utils.py 58.54% <66.66%> (+1.32%) ⬆️
src/squidpy/experimental/pl/_tiling_qc.py 64.70% <64.70%> (ø)
src/squidpy/experimental/im/_tiling.py 59.39% <59.39%> (ø)
src/squidpy/experimental/tl/_tiling_qc.py 64.88% <64.88%> (ø)
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