Link to the interoperability docs from the packages and learn pages - #263
Open
Zethson wants to merge 3 commits into
Open
Link to the interoperability docs from the packages and learn pages#263Zethson wants to merge 3 commits into
Zethson wants to merge 3 commits into
Conversation
The packages page already claimed that building on common data structures ensures interoperability, without backing that claim with anything concrete. The Getting Started intro never mentioned that scverse data is reachable outside Python at all. Both now link to the AnnData interoperability page, which lists the R, Julia, JavaScript, and Rust implementations and is maintained upstream, so the list cannot go stale here. Closes #74 Signed-off-by: Lukas Heumos <lukas.heumos@posteo.net>
✅ Deploy Preview for jade-cajeta-1bcca0 ready!
To edit notification comments on pull requests, go to your Netlify project configuration. |
The first pass only named AnnData, in a blurb that heads all three cards. mudata and spatialdata gained interoperability pages of their own this month (scverse/mudata#189, scverse/spatialdata#1180), so each card now carries an Interoperability link and the section blurb no longer singles one format out. The mudata card loses its Muon.jl chip: with a sibling Interoperability link that lists Muon.jl alongside the R options, a Julia-only chip reads as arbitrary. Signed-off-by: Lukas Heumos <lukas.heumos@posteo.net>
Member
Author
|
Should only be merged when the docs for both mudata and spatialdata have been rebuilt so that the URLs resolve |
Currently 404s because the interoperability page is not in a release yet; it resolves once the next spatialdata release ships. Signed-off-by: Lukas Heumos <lukas.heumos@posteo.net>
Zethson
force-pushed
the
interoperability-links
branch
from
August 23, 2026 17:48
7a44774 to
0538c9e
Compare
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Closes #74.
Adds an Interoperability link to each of the three data structure cards on the packages page, and one sentence in the Getting Started intro pointing at the same pages for AnnData, MuData, and SpatialData. Not added to the front page, and the mudata card's now-redundant Muon.jl chip is dropped.