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Link to the interoperability docs from the packages and learn pages - #263

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interoperability-links
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Link to the interoperability docs from the packages and learn pages#263
Zethson wants to merge 3 commits into
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interoperability-links

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@Zethson Zethson commented Aug 23, 2026

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Closes #74.

Adds an Interoperability link to each of the three data structure cards on the packages page, and one sentence in the Getting Started intro pointing at the same pages for AnnData, MuData, and SpatialData. Not added to the front page, and the mudata card's now-redundant Muon.jl chip is dropped.

The packages page already claimed that building on common data structures ensures interoperability, without backing that claim with anything concrete.
The Getting Started intro never mentioned that scverse data is reachable outside Python at all.
Both now link to the AnnData interoperability page, which lists the R, Julia, JavaScript, and Rust implementations and is maintained upstream, so the list cannot go stale here.

Closes #74

Signed-off-by: Lukas Heumos <lukas.heumos@posteo.net>
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The first pass only named AnnData, in a blurb that heads all three cards.
mudata and spatialdata gained interoperability pages of their own this month (scverse/mudata#189, scverse/spatialdata#1180), so each card now carries an Interoperability link and the section blurb no longer singles one format out.
The mudata card loses its Muon.jl chip: with a sibling Interoperability link that lists Muon.jl alongside the R options, a Julia-only chip reads as arbitrary.

Signed-off-by: Lukas Heumos <lukas.heumos@posteo.net>
@Zethson Zethson changed the title Link to AnnData interoperability docs from packages and learn pages Link to the interoperability docs from the packages and learn pages Aug 23, 2026
@Zethson

Zethson commented Aug 23, 2026

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Should only be merged when the docs for both mudata and spatialdata have been rebuilt so that the URLs resolve

Currently 404s because the interoperability page is not in a release yet; it resolves once the next spatialdata release ships.

Signed-off-by: Lukas Heumos <lukas.heumos@posteo.net>
@Zethson
Zethson force-pushed the interoperability-links branch from 7a44774 to 0538c9e Compare August 23, 2026 17:48
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Interoperability

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