feat(bam): --outBAMsortingBinsN, spilling the coordinate sort to disk bins - #263

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BenjaminDEMAILLE wants to merge 6 commits into

scverse:mainfrom

BenjaminDEMAILLE:perf/bam-incremental-spill

Commits on Aug 26, 2026

feat(bam): --outBAMsortingBinsN spills the coordinate sort to disk bins

BenjaminDEMAILLE
and
claude
committed
1979b78
test(bam): exceeding limitBAMsortRAM now spills instead of aborting

BenjaminDEMAILLE
and
claude
committed
83b1bba
docs(changelog): record --outBAMsortingBinsN

BenjaminDEMAILLE
and
claude
committed
0004c68
docs(changelog): say decoded records, not BAM bytes

BenjaminDEMAILLE
and
claude
committed
c7a79cf
fix(params): drop the duplicate --outBAMsortingBinsN declaration after the rebase
BenjaminDEMAILLE
committed
c3200fa

Commits on Aug 30, 2026

fix(bam): enforce limitBAMsortRAM while records arrive, not after

BenjaminDEMAILLE
and
claude
committed
ec11a42