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Add actinn-jax to the ecosystem package registry #405

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22 changes: 22 additions & 0 deletions packages/actinn-jax/meta.yaml
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name: actinn-jax
description: |
actinn-jax is a JAX reimplementation of ACTINN for cell-type annotation of scRNA-seq
data. It trains a neural-network classifier from a labelled AnnData reference and
annotates query AnnData objects on CPU. Pre-trained human references are bundled or
downloaded on first use, gene identifiers are matched between reference and query
automatically, and a two-stage coarse-to-fine workflow supports atlas-scale references.
project_home: https://github.com/iandriver/actinn-jax
documentation_home: https://github.com/iandriver/actinn-jax#readme
install:
pypi: actinn-jax
primary_category: scRNA-seq
tags:
- scRNA-seq
- cell-type annotation
- deep learning
license: MIT
language: Python
contact:
- iandriver
test_command: pip install -e '.[test]' && pytest
category: ecosystem
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