RNAseq_drylab

Complete pipeline for analysis of RNA-seq data starting from the raw sequencing files with preprocessing, quality control, mapping and quantification, and then continuing with downstream data analysis for comparison of mus musculus fibroblast cells (GP38+) in different organs at the steady state. The data is taken from the "Structural cells are key regulators of organ-specific immune responses" (2020) paper by Krausgruber et al. and is accessible on the NCBI Gene Expression Omnibus (GEO) repository under accession number GSE134663.