Skip to content

Updates to copyright for Summer 2026 #2037

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
daviesrob merged 1 commit into from
Jun 17, 2026
Merged

Updates to copyright for Summer 2026 #2037

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
4 changes: 2 additions & 2 deletions LICENSE
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -3,7 +3,7 @@ according to the terms of the following MIT/Expat license.]

The MIT/Expat License

Copyright (C) 2012-2025 Genome Research Ltd.
Copyright (C) 2012-2026 Genome Research Ltd.

Permission is hereby granted, free of charge, to any person obtaining a copy
of this software and associated documentation files (the "Software"), to deal
Expand All @@ -29,7 +29,7 @@ according to the terms of the following Modified 3-Clause BSD license.]

The Modified-BSD License

Copyright (C) 2012-2025 Genome Research Ltd.
Copyright (C) 2012-2026 Genome Research Ltd.

Redistribution and use in source and binary forms, with or without
modification, are permitted provided that the following conditions are met:
Expand Down
2 changes: 1 addition & 1 deletion Makefile
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
# Makefile for htslib, a C library for high-throughput sequencing data formats.
#
# Copyright (C) 2013-2025 Genome Research Ltd.
# Copyright (C) 2013-2026 Genome Research Ltd.
#
# Author: John Marshall <jm18@sanger.ac.uk>
#
Expand Down
2 changes: 1 addition & 1 deletion annot-tsv.c
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -991,7 +991,7 @@ int main(int argc, char **argv)
case 1 :
printf(
"annot-tsv (htslib) %s\n"
"Copyright (C) 2025 Genome Research Ltd.\n", hts_version());
"Copyright (C) 2026 Genome Research Ltd.\n", hts_version());
return EXIT_SUCCESS;
break;
case 2 :
Expand Down
2 changes: 1 addition & 1 deletion bcf_sr_sort.c
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
/*
Copyright (C) 2017-2021,2024 Genome Research Ltd.
Copyright (C) 2017-2021,2024, 2026 Genome Research Ltd.
Author: Petr Danecek <pd3@sanger.ac.uk>
Expand Down
2 changes: 1 addition & 1 deletion bgzf.c
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@
Copyright (c) 2008 Broad Institute / Massachusetts Institute of Technology
2011, 2012 Attractive Chaos <attractor@live.co.uk>
Copyright (C) 2009, 2013-2025 Genome Research Ltd
Copyright (C) 2009, 2013-2026 Genome Research Ltd
Permission is hereby granted, free of charge, to any person obtaining a copy
of this software and associated documentation files (the "Software"), to deal
Expand Down
2 changes: 1 addition & 1 deletion bgzip.c
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -268,7 +268,7 @@ int main(int argc, char **argv)
case 1:
printf(
"bgzip (htslib) %s\n"
"Copyright (C) 2025 Genome Research Ltd.\n", hts_version());
"Copyright (C) 2026 Genome Research Ltd.\n", hts_version());
return EXIT_SUCCESS;
case 2: binary = 1; break;
case 'h': return bgzip_main_usage(stdout, EXIT_SUCCESS);
Expand Down
2 changes: 1 addition & 1 deletion config.mk.in
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
# Optional configure Makefile overrides for htslib.
#
# Copyright (C) 2015-2017, 2019, 2023 Genome Research Ltd.
# Copyright (C) 2015-2017, 2019, 2023, 2025 Genome Research Ltd.
#
# Author: John Marshall <jm18@sanger.ac.uk>
#
Expand Down
4 changes: 2 additions & 2 deletions configure.ac
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
# Configure script for htslib, a C library for high-throughput sequencing data.
#
# Copyright (C) 2015-2025 Genome Research Ltd.
# Copyright (C) 2015-2026 Genome Research Ltd.
#
# Author: John Marshall <jm18@sanger.ac.uk>
#
Expand Down Expand Up @@ -35,7 +35,7 @@ m4_include([m4/hts_hide_dynamic_syms.m4])
m4_include([m4/pkg.m4])

dnl Copyright notice to be copied into the generated configure script
AC_COPYRIGHT([Portions copyright (C) 2020-2025 Genome Research Ltd.
AC_COPYRIGHT([Portions copyright (C) 2020-2026 Genome Research Ltd.

This configure script is free software: you are free to change and
redistribute it. There is NO WARRANTY, to the extent permitted by law.])
Expand Down
2 changes: 1 addition & 1 deletion cram/cram_codecs.h
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
/*
Copyright (c) 2012-2015, 2018, 2020, 2023 Genome Research Ltd.
Copyright (c) 2012-2015, 2018, 2020, 2023, 2026 Genome Research Ltd.
Author: James Bonfield <jkb@sanger.ac.uk>
Redistribution and use in source and binary forms, with or without
Expand Down
2 changes: 1 addition & 1 deletion cram/cram_encode.c
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
/*
Copyright (c) 2012-2020, 2022-2025 Genome Research Ltd.
Copyright (c) 2012-2020, 2022-2026 Genome Research Ltd.
Author: James Bonfield <jkb@sanger.ac.uk>
Redistribution and use in source and binary forms, with or without
Expand Down
2 changes: 1 addition & 1 deletion cram/cram_index.c
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
/*
Copyright (c) 2013-2020, 2023-2024 Genome Research Ltd.
Copyright (c) 2013-2020, 2023-2024, 2026 Genome Research Ltd.
Author: James Bonfield <jkb@sanger.ac.uk>
Redistribution and use in source and binary forms, with or without
Expand Down
2 changes: 1 addition & 1 deletion cram/cram_io.c
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
/*
Copyright (c) 2012-2025 Genome Research Ltd.
Copyright (c) 2012-2026 Genome Research Ltd.
Author: James Bonfield <jkb@sanger.ac.uk>
Redistribution and use in source and binary forms, with or without
Expand Down
2 changes: 1 addition & 1 deletion cram/cram_stats.c
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
/*
Copyright (c) 2012-2014, 2016, 2018, 2020 Genome Research Ltd.
Copyright (c) 2012-2014, 2016, 2018, 2020, 2026 Genome Research Ltd.
Author: James Bonfield <jkb@sanger.ac.uk>
Redistribution and use in source and binary forms, with or without
Expand Down
2 changes: 1 addition & 1 deletion cram/cram_structs.h
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
/*
Copyright (c) 2012-2016, 2018-2020, 2023 Genome Research Ltd.
Copyright (c) 2012-2016, 2018-2020, 2023, 2026 Genome Research Ltd.
Author: James Bonfield <jkb@sanger.ac.uk>
Redistribution and use in source and binary forms, with or without
Expand Down
2 changes: 1 addition & 1 deletion cram/string_alloc.c
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
/*
Copyright (c) 2010, 2013, 2018-2019 Genome Research Ltd.
Copyright (c) 2010, 2013, 2018-2019, 2026 Genome Research Ltd.
Author: Andrew Whitwham <aw7@sanger.ac.uk>
Redistribution and use in source and binary forms, with or without
Expand Down
2 changes: 1 addition & 1 deletion faidx.c
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
/* faidx.c -- FASTA and FASTQ random access.
Copyright (C) 2008, 2009, 2013-2020, 2022, 2024 Genome Research Ltd.
Copyright (C) 2008, 2009, 2013-2020, 2022, 2024, 2026 Genome Research Ltd.
Portions copyright (C) 2011 Broad Institute.
Author: Heng Li <lh3@sanger.ac.uk>
Expand Down
2 changes: 1 addition & 1 deletion header.c
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
/*
Copyright (c) 2018-2020, 2023, 2025 Genome Research Ltd.
Copyright (c) 2018-2020, 2023, 2025-2026 Genome Research Ltd.
Authors: James Bonfield <jkb@sanger.ac.uk>, Valeriu Ohan <vo2@sanger.ac.uk>
Redistribution and use in source and binary forms, with or without
Expand Down
2 changes: 1 addition & 1 deletion hfile.c
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
/* hfile.c -- buffered low-level input/output streams.
Copyright (C) 2013-2021, 2023-2024 Genome Research Ltd.
Copyright (C) 2013-2021, 2023-2025 Genome Research Ltd.
Author: John Marshall <jm18@sanger.ac.uk>
Expand Down
2 changes: 1 addition & 1 deletion hfile_libcurl.c
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
/* hfile_libcurl.c -- libcurl backend for low-level file streams.
Copyright (C) 2015-2017, 2019-2020 Genome Research Ltd.
Copyright (C) 2015-2017, 2019-2020, 2026 Genome Research Ltd.
Author: John Marshall <jm18@sanger.ac.uk>
Expand Down
2 changes: 1 addition & 1 deletion hfile_s3.c
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
/* hfile_s3.c -- Amazon S3 backend for low-level file streams.
Copyright (C) 2015-2017, 2019-2025 Genome Research Ltd.
Copyright (C) 2015-2017, 2019-2026 Genome Research Ltd.
Author: John Marshall <jm18@sanger.ac.uk>
Expand Down
2 changes: 1 addition & 1 deletion hts.c
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
/* hts.c -- format-neutral I/O, indexing, and iterator API functions.
Copyright (C) 2008, 2009, 2012-2025 Genome Research Ltd.
Copyright (C) 2008, 2009, 2012-2026 Genome Research Ltd.
Copyright (C) 2012, 2013 Broad Institute.
Author: Heng Li <lh3@sanger.ac.uk>
Expand Down
2 changes: 1 addition & 1 deletion htsfile.c
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -250,7 +250,7 @@ int main(int argc, char **argv)
case 1:
printf(
"htsfile (htslib) %s\n"
"Copyright (C) 2025 Genome Research Ltd.\n",
"Copyright (C) 2026 Genome Research Ltd.\n",
hts_version());
exit(EXIT_SUCCESS);
break;
Expand Down
2 changes: 1 addition & 1 deletion htslib/bgzf.h
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -3,7 +3,7 @@
/*
Copyright (c) 2008 Broad Institute / Massachusetts Institute of Technology
2011, 2012 Attractive Chaos <attractor@live.co.uk>
Copyright (C) 2009, 2013, 2014, 2017, 2018-2019, 2022-2024 Genome Research Ltd
Copyright (C) 2009, 2013, 2014, 2017, 2018-2019, 2022-2024, 2026 Genome Research Ltd
Permission is hereby granted, free of charge, to any person obtaining a copy
of this software and associated documentation files (the "Software"), to deal
Expand Down
2 changes: 1 addition & 1 deletion htslib/hfile.h
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
/// @file htslib/hfile.h
/// Buffered low-level input/output streams.
/*
Copyright (C) 2013-2022 Genome Research Ltd.
Copyright (C) 2013-2022, 2025 Genome Research Ltd.
Author: John Marshall <jm18@sanger.ac.uk>
Expand Down
2 changes: 1 addition & 1 deletion htslib/hts_defs.h
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
/* hts_defs.h -- Miscellaneous definitions.
Copyright (C) 2013-2015,2017, 2019-2020, 2024 Genome Research Ltd.
Copyright (C) 2013-2015,2017, 2019-2020, 2024, 2026 Genome Research Ltd.
Author: John Marshall <jm18@sanger.ac.uk>
Expand Down
2 changes: 1 addition & 1 deletion htslib/synced_bcf_reader.h
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
/// @file htslib/synced_bcf_reader.h
/// Stream through multiple VCF files.
/*
Copyright (C) 2012-2017, 2019-2025 Genome Research Ltd.
Copyright (C) 2012-2017, 2019-2026 Genome Research Ltd.
Author: Petr Danecek <pd3@sanger.ac.uk>
Expand Down
2 changes: 1 addition & 1 deletion htslib/vcf.h
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@
/// High-level VCF/BCF variant calling file operations.
/*
Copyright (C) 2012, 2013 Broad Institute.
Copyright (C) 2012-2020, 2022-2025 Genome Research Ltd.
Copyright (C) 2012-2020, 2022-2026 Genome Research Ltd.
Author: Heng Li <lh3@sanger.ac.uk>
Expand Down
2 changes: 1 addition & 1 deletion kstring.c
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
/* The MIT License
Copyright (C) 2011 by Attractive Chaos <attractor@live.co.uk>
Copyright (C) 2013-2018, 2020-2021, 2023, 2025 Genome Research Ltd.
Copyright (C) 2013-2018, 2020-2021, 2023, 2025-2026 Genome Research Ltd.
Permission is hereby granted, free of charge, to any person obtaining
a copy of this software and associated documentation files (the
Expand Down
2 changes: 1 addition & 1 deletion ref_cache/poll_wrap_poll.c
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
/* poll_wrap_poll.c -- ref-cache wrapper around poll
Copyright (C) 2025 Genome Research Ltd.
Copyright (C) 2025-2026 Genome Research Ltd.
Author: Rob Davies <rmd@sanger.ac.uk>
Expand Down
2 changes: 1 addition & 1 deletion sam.c
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
/* sam.c -- SAM and BAM file I/O and manipulation.
Copyright (C) 2008-2010, 2012-2025 Genome Research Ltd.
Copyright (C) 2008-2010, 2012-2026 Genome Research Ltd.
Copyright (C) 2010, 2012, 2013 Broad Institute.
Author: Heng Li <lh3@sanger.ac.uk>
Expand Down
2 changes: 1 addition & 1 deletion synced_bcf_reader.c
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
/* synced_bcf_reader.c -- stream through multiple VCF files.
Copyright (C) 2012-2023, 2025 Genome Research Ltd.
Copyright (C) 2012-2023, 2025-2026 Genome Research Ltd.
Author: Petr Danecek <pd3@sanger.ac.uk>
Expand Down
2 changes: 1 addition & 1 deletion tabix.1
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -4,7 +4,7 @@
tabix \- Generic indexer for TAB-delimited genome position files
.\"
.\" Copyright (C) 2009-2011 Broad Institute.
.\" Copyright (C) 2014, 2016, 2018, 2020, 2022, 2024 Genome Research Ltd.
.\" Copyright (C) 2014, 2016, 2018, 2020, 2022, 2024, 2026 Genome Research Ltd.
.\"
.\" Author: Heng Li <lh3@sanger.ac.uk>
.\"
Expand Down
4 changes: 2 additions & 2 deletions tabix.c
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
/* tabix.c -- Generic indexer for TAB-delimited genome position files.
Copyright (C) 2009-2011 Broad Institute.
Copyright (C) 2010-2012, 2014-2020, 2024 Genome Research Ltd.
Copyright (C) 2010-2012, 2014-2020, 2024, 2026 Genome Research Ltd.
Author: Heng Li <lh3@sanger.ac.uk>
Expand Down Expand Up @@ -734,7 +734,7 @@ int main(int argc, char *argv[])
case 1:
printf(
"tabix (htslib) %s\n"
"Copyright (C) 2025 Genome Research Ltd.\n", hts_version());
"Copyright (C) 2026 Genome Research Ltd.\n", hts_version());
return EXIT_SUCCESS;
case 2:
return usage(stdout, EXIT_SUCCESS);
Expand Down
2 changes: 1 addition & 1 deletion tbx.c
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
/* tbx.c -- tabix API functions.
Copyright (C) 2009, 2010, 2012-2015, 2017-2020, 2022-2023, 2025 Genome Research Ltd.
Copyright (C) 2009, 2010, 2012-2015, 2017-2020, 2022-2023, 2025-2026 Genome Research Ltd.
Copyright (C) 2010-2012 Broad Institute.
Author: Heng Li <lh3@sanger.ac.uk>
Expand Down
2 changes: 1 addition & 1 deletion test/tabix/tabix.tst
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
# Copyright (C) 2017, 2024 Genome Research Ltd.
# Copyright (C) 2017, 2024, 2026 Genome Research Ltd.
#
# Author: Robert Davies <rmd@sanger.ac.uk>
#
Expand Down
2 changes: 1 addition & 1 deletion test/test.pl
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
#!/usr/bin/env perl
#
# Copyright (C) 2012-2025 Genome Research Ltd.
# Copyright (C) 2012-2026 Genome Research Ltd.
#
# Author: Petr Danecek <pd3@sanger.ac.uk>
#
Expand Down
2 changes: 1 addition & 1 deletion test/test_kstring.c
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
/* test_kstring.c -- kstring unit tests
Copyright (C) 2018, 2020, 2024-2025 Genome Research Ltd.
Copyright (C) 2018, 2020, 2024-2026 Genome Research Ltd.
Author: Rob Davies <rmd@sanger.ac.uk>
Expand Down
2 changes: 1 addition & 1 deletion vcf.c
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,7 +1,7 @@
/* vcf.c -- VCF/BCF API functions.
Copyright (C) 2012, 2013 Broad Institute.
Copyright (C) 2012-2025 Genome Research Ltd.
Copyright (C) 2012-2026 Genome Research Ltd.
Portions copyright (C) 2014 Intel Corporation.
Author: Heng Li <lh3@sanger.ac.uk>
Expand Down
Loading