After installation of SCORPIUS and Seurat, I ran the code vignette("seurat", package="SCORPIUS") in an attempt to read one of the vignettes containing more elaborate examples, but there wasn't any vignette. Hope to get the help. Thank you.
> vignette("seurat", package="SCORPIUS") Warning message: vignette ‘seurat’ not found
> vignette("Seurat", package="SCORPIUS") Warning message: vignette ‘Seurat’ not found
Vignettes in package ‘SCORPIUS’: ginhoux Investigating dendritic cell maturation in dendritic cell progenitors (source, html) anndata Running SCORPIUS on a AnnData object (source, html) singlecellexperiment Running SCORPIUS on a SingleCellExperiment object (source, html) simulated-data Trajectory inference from simulated data (source, html)
After installation of SCORPIUS and Seurat, I ran the code
vignette("seurat", package="SCORPIUS")in an attempt to read one of the vignettes containing more elaborate examples, but there wasn't any vignette. Hope to get the help. Thank you.> vignette("seurat", package="SCORPIUS") Warning message: vignette ‘seurat’ not found> vignette("Seurat", package="SCORPIUS") Warning message: vignette ‘Seurat’ not foundVignettes in package ‘SCORPIUS’: ginhoux Investigating dendritic cell maturation in dendritic cell progenitors (source, html) anndata Running SCORPIUS on a AnnData object (source, html) singlecellexperiment Running SCORPIUS on a SingleCellExperiment object (source, html) simulated-data Trajectory inference from simulated data (source, html)