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Speed up find_pairs by using a Numba-optimised kd-tree for searching M to build S#104

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rhm31-speed-up-find-pairs-redux
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Speed up find_pairs by using a Numba-optimised kd-tree for searching M to build S#104
robinmessage wants to merge 3 commits into
mainfrom
rhm31-speed-up-find-pairs-redux

Fixes from code review and better comments on RumbaTree

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