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@rworkflow Workflow Languages in R

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    17 repositories

    • coala

      Public
      Convert any CMD Tools into LLM Agents
      Common Workflow Language
      •0•0•0•0•Updated Dec 29, 2025Dec 29, 2025

    • coala_client

      Public
      Python
      •1•0•0•0•Updated Dec 29, 2025Dec 29, 2025

    • RcwlRecipes

      Public
      pipelinescwlcwl-workflow
      pipelinescwlcwl-workflow
      Common Workflow Language
      •3•4•0•0•Updated Sep 9, 2024Sep 9, 2024

    • Rcwl

      Public
      Write CWL in R
      rcwlbioconductor-package
      rcwlbioconductor-package
      R
      •
      GNU General Public License v2.0
      •4•15•1•0•Updated May 9, 2024May 9, 2024

    • ReUseDataRecipe

      Public
      R
      •1•0•1•0•Updated Dec 4, 2023Dec 4, 2023

    • ReUseData

      Public
      R
      •
      GNU General Public License v3.0
      •0•4•3•0•Updated Nov 23, 2023Nov 23, 2023

    • RcwlPipelines

      Public
      A collection of pipeline recipes based on Rcwl.
      R
      •2•8•0•0•Updated Nov 15, 2023Nov 15, 2023

    • RcwlWorkshop

      Public
      Dockerfile
      •
      Other
      •0•0•0•0•Updated Aug 1, 2023Aug 1, 2023

    • rworkflow.github.io

      Public
      HTML
      •0•1•0•0•Updated Jul 28, 2023Jul 28, 2023

    • RcwlMeta

      Public
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jan 25, 2023Jan 25, 2023

    • Bioc2022_Rcwl_demo

      Public
      Rcwl/RcwlPipelines: Use R to Build, Read, Write, and Execute CWL Workflows
      Dockerfile
      •
      Other
      •3•0•0•0•Updated Jul 28, 2022Jul 28, 2022

    • RcwlCloud

      Public
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Feb 18, 2022Feb 18, 2022

    • CGClient

      Public
      R client for the Cancer Genomics Cloud.
      R
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Oct 25, 2021Oct 25, 2021

    • Rcwl_scRNAseq

      Public
      Bioconductor toolchain for usage and development of reproducible bioinformatics pipelines
      Dockerfile
      •
      Other
      •3•1•0•0•Updated Mar 5, 2021Mar 5, 2021

    • RcwlBook

      Public
      CSS
      •
      Creative Commons Zero v1.0 Universal
      •0•0•0•0•Updated Feb 27, 2021Feb 27, 2021

    • testdata

      Public
      0•1•0•0•Updated Feb 23, 2021Feb 23, 2021

    • Rsnakemake

      Public
      R
      •
      Other
      •1•0•0•0•Updated Feb 4, 2021Feb 4, 2021
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