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    • ProteomeXchange data submission tool
      Java
      6485Updated Jun 2, 2026Jun 2, 2026
    • The PRIDE ontology
      Creative Commons Attribution 4.0 International
      15300Updated Jun 1, 2026Jun 1, 2026
    • Python
      Apache License 2.0
      8064Updated Jun 1, 2026Jun 1, 2026
    • xiview-api provides REST endpoints to access crosslinking resources in PRIDE
      Python
      Apache License 2.0
      4250Updated Jun 1, 2026Jun 1, 2026
    • pridepy

      Public
      Python client for PRIDE Archive Rest API.
      Python
      Apache License 2.0
      94000Updated May 30, 2026May 30, 2026
    • PRIDE Resources Forum (https://github.com/PRIDE-Archive/pride-resources/discussions)
      Apache License 2.0
      6200Updated May 21, 2026May 21, 2026
    • Redis implementation to communicate among micro services
      Java
      0041Updated May 21, 2026May 21, 2026
    • Repository of opentargets scripts to move data from PRIDE expression to OpenTargets.
      Python
      Apache License 2.0
      2012Updated May 6, 2026May 6, 2026
    • validate SDRF throught api
      HTML
      Apache License 2.0
      0021Updated Apr 30, 2026Apr 30, 2026
    • Test public package access
      Java
      0000Updated Apr 14, 2026Apr 14, 2026
    • A pipeline to calculate number of file downloads
      Python
      Apache License 2.0
      2100Updated Apr 9, 2026Apr 9, 2026
    • jsdrf

      Public
      java library to validate SDRF file formats
      Java
      Apache License 2.0
      3010Updated Apr 9, 2026Apr 9, 2026
    • Java ols client designed for OLS-Dialog tool
      Java
      7301Updated Apr 9, 2026Apr 9, 2026
    • CSS
      2000Updated Apr 8, 2026Apr 8, 2026
    • Java
      Apache License 2.0
      1002Updated Apr 7, 2026Apr 7, 2026
    • pyprideap

      Public
      pyprideap is a library to handle affinity proteomics files from PRIDE database; including reading; parsing validating and other algorithms
      Python
      Apache License 2.0
      2200Updated Mar 24, 2026Mar 24, 2026
    • deeplogbot: A hybrid Isolation Forest, and Transformer-based system for detecting bot behavior in log data.
      Python
      MIT License
      1100Updated Mar 21, 2026Mar 21, 2026
    • 0000Updated Mar 2, 2026Mar 2, 2026
    • HTML
      3011Updated Jan 23, 2026Jan 23, 2026
    • Python
      0000Updated Dec 11, 2025Dec 11, 2025
    • Main Quetzal annotator code
      Python
      Apache License 2.0
      2000Updated Jul 23, 2025Jul 23, 2025
    • Protein details fetcher from Repositories UNIPROT, ENSEMBL
      Java
      Apache License 2.0
      1001Updated Jul 12, 2025Jul 12, 2025
    • pride-mod

      Public
      PRIDE-Mod is a Java API to handle different modifications such as UNIMOD or PSI-MOD.
      Java
      2422Updated Jul 12, 2025Jul 12, 2025
    • .github

      Public
      Apache License 2.0
      0000Updated Feb 1, 2025Feb 1, 2025
    • xxindex

      Public
      A library to index XML files for random access.
      Java
      5210Updated Oct 7, 2024Oct 7, 2024
    • A standardized browser-based spreadsheet editor and validator that can be run offline and locally.
      JavaScript
      MIT License
      38000Updated Aug 22, 2024Aug 22, 2024
    • 0000Updated May 20, 2024May 20, 2024
    • Dockerfile
      0000Updated Apr 18, 2024Apr 18, 2024
    • epma

      Public
      European Proteome-Metabolome Archive
      Apache License 2.0
      00110Updated Jan 6, 2024Jan 6, 2024
    • Affinity Proteomics include the documentation, examples and issue for the Project.
      Apache License 2.0
      0080Updated Jan 5, 2024Jan 5, 2024
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