Issues

• The gene makers to identify the T cell CD8+ memory and T cell CD8+ effector memory

  question
  omnideconv/immunedeconv#191 · Filter by author HeleneZhao opened on Oct 3, 2025
  1

• Installation problem in R

  bug
  omnideconv/immunedeconv#182 · Filter by author Poocee opened on Jun 8, 2025
  1

• Error running deconvolute_cibersort_custom()

  bug
  omnideconv/immunedeconv#180 · Filter by author kevin198930 opened on Feb 13, 2025

• Library not loading in R (version 4.3.0)

  bug
  omnideconv/immunedeconv#178 · Filter by author bellx059 opened on Jan 28, 2025
  1

• Running quantiseq

  bug
  omnideconv/immunedeconv#171 · Filter by author sjb-a11y opened on Sep 12, 2024
  3

  

• Immunedeconv terminates for (non-)duplicate gene symbols

  bug
  omnideconv/immunedeconv#170 · Filter by author suhuanhou opened on Apr 25, 2024
  3

• None identical gene between eset and reference had been found. Check your eset using: intersect(rownames(eset), rownames(reference))

  bug
  omnideconv/immunedeconv#168 · Filter by author LeaLe88 opened on Feb 1, 2024
  2

• The path argument of write_tsv() is deprecated as of readr 1.4.0.

  bug
  omnideconv/immunedeconv#165 · Filter by author knezdora opened on Jan 19, 2024

• Deconvolution analysis - N of 1

  enhancement
  omnideconv/immunedeconv#163 · Filter by author sigven opened on Dec 14, 2023

• Error in quanTIseq Deconvolution: Duplicate 'row.names' Not Allowed

  bug
  omnideconv/immunedeconv#160 · Filter by author pamonlan opened on Dec 2, 2023
  1

• map_result_to_celltypes consensus_tme

  bug
  omnideconv/immunedeconv#159 · Filter by author PierreLaplante opened on Nov 29, 2023

• [Please-fix-this] Annotation discrepancies in the <immunedeconv::cell_type_map>

  bug
  omnideconv/immunedeconv#156 · Filter by author jinhys opened on Nov 15, 2023
  5

• Feature request: BLADE deconvolution method

  enhancement
  omnideconv/immunedeconv#152 · Filter by author mschubert opened on Oct 30, 2023

• Unable to load immunedeconv

  bug
  omnideconv/immunedeconv#148 · Filter by author malonzm1 opened on Jun 21, 2023
  12

• Error by using mouse_genes_to_human function

  bug
  omnideconv/immunedeconv#147 · Filter by author kongjianyang opened on May 30, 2023
  1

• Immunedeconv terminates for (non-)duplicate gene symbols

  bug
  omnideconv/immunedeconv#146 · Filter by author axelgschwind opened on May 15, 2023
  7

• Error message when running CIBERSORT

  bug
  omnideconv/immunedeconv#137 · Filter by author ValerieCrolley opened on Mar 1, 2023
  17

• Issue with ESTIMATE inner_join()

  bug
  omnideconv/immunedeconv#126 · Filter by author szymczakpau opened on Oct 10, 2022
  5

• GLIBCXX_3.4.30 not found when trying to use timer

  bug
  omnideconv/immunedeconv#125 · Filter by author szymczakpau opened on Oct 10, 2022
  1

• TPM-normalized

  enhancement
  omnideconv/immunedeconv#123 · Filter by author hanxuelian opened on Sep 15, 2022
  1

• patched mcp counter dependencies

  bug
  omnideconv/immunedeconv#112 · Filter by author grst opened on Jul 5, 2022

• Add developer docs

  omnideconv/immunedeconv#99 · Filter by author grst opened on May 14, 2022

• Return missing genes for each tool

  enhancement
  omnideconv/immunedeconv#95 · Filter by author anabbi opened on May 6, 2022
  1

• Warning pops up in the "Getting started" section

  bug
  omnideconv/immunedeconv#92 · Filter by author grst opened on Apr 29, 2022
  1

• add path to geneset for MCPCOUNTER

  enhancement
  omnideconv/immunedeconv#91 · Filter by author anabbi opened on Apr 29, 2022
  2