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matthdsm
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Mar 5, 2026
| def base = "${meta.id}/${meta.id}${meta.variant_type ? '.' + meta.variant_type : ''}" | ||
| vcf >> "${base}.vcf.gz" | ||
| tbi >> "${base}.vcf.gz.tbi" | ||
| vcf >> "${meta.id}/${meta.id}${meta.variant_type ? '.' + meta.variant_type : ''}" + ".vcf.gz" |
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it's not needed as all logic happens in a string interpolation
matthdsm
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Mar 5, 2026
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PR checklist
nf-core pipelines lint).nextflow run . -profile test,docker --outdir <OUTDIR>).nextflow run . -profile debug,test,docker --outdir <OUTDIR>).docs/usage.mdis updated.docs/output.mdis updated.nf-core schema docs --format markdown --output docs/parameters.md --forceCHANGELOG.mdis updated.README.mdis updated (including new tool citations and authors/contributors).