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Very ad-hoc / temporary approach I used to generate FASTA files which I could then use as inputs for avian-flu builds. Avoids any use of the rethink db. See <nextstrain/avian-flu#108> for the corresponding avian-flu work.
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Very ad-hoc / temporary approach I used to generate FASTA files which I could then use as inputs for avian-flu builds.
Avoids any use of the rethink db.
See nextstrain/avian-flu#108 for the corresponding avian-flu work.
It'd be nice to have a way to use fauna to curate data without involving the db (rethink). For H7N6 there are <200 sequences so we can get everything from GISAID each time.
If this PR is still up in ~a months time feel free to close it.