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d103fac
add validate_dfc
mtorabi59 Apr 23, 2026
ca54be2
add new ai generated methods + instructions md
mtorabi59 Apr 23, 2026
3b7e0be
add new methods to multi_analysis_utils.py
mtorabi59 Apr 23, 2026
b4e4eff
Merge branch 'main' into highthroughput_dFC
mtorabi59 Apr 24, 2026
af65fc2
Merge branch 'task_dFC' into highthroughput_dFC
mtorabi59 Apr 25, 2026
87061ce
Merge branch 'task_dFC' into highthroughput_dFC
mtorabi59 Apr 26, 2026
d3de966
Merge branch 'task_dFC' into highthroughput_dFC
mtorabi59 Apr 27, 2026
205106d
improve name display in dfc_visualization
mtorabi59 Apr 27, 2026
6614e39
add generated SB methods
mtorabi59 May 8, 2026
f5aa4cb
improve hyperparam definition
mtorabi59 May 16, 2026
fdd573b
minor
mtorabi59 May 16, 2026
ea8f350
add auto method detection to multi_analysis_utils
mtorabi59 May 17, 2026
e61a767
change MEASURE_NAME convention, make it class-level
mtorabi59 May 17, 2026
cbdcc7a
FCS_proba of new methods fixed
mtorabi59 May 18, 2026
6c50c26
add assess_similarity_fast
mtorabi59 Jun 2, 2026
a3fc6fa
make dFC_mat_lst_similarity faster
mtorabi59 Jun 3, 2026
7f0c898
reduce quick validation checks to API chekcs
mtorabi59 Jun 4, 2026
3a45eea
add methods generated by Claude Code
mtorabi59 Jun 4, 2026
d8b4e10
Add code to compute similarity between methods
Jun 4, 2026
e2120aa
Merge branch 'mtorabi59:highthroughput_dFC' into highthroughput_dFC
kinichen Jun 4, 2026
733a554
fix python version of CC
mtorabi59 Jun 8, 2026
dbb93bb
minor
mtorabi59 Jun 8, 2026
53f3b93
minor fix
mtorabi59 Jun 8, 2026
032cf0c
minor fix
mtorabi59 Jun 8, 2026
6fd4400
add retry to run_ML
mtorabi59 Jun 9, 2026
d886950
add retry for run_dFC and run_FCS
mtorabi59 Jun 9, 2026
d2db4c3
improve ml result figures
mtorabi59 Jun 10, 2026
dad3a58
minor
mtorabi59 Jun 12, 2026
46bbdd2
minor
mtorabi59 Jun 12, 2026
8fdb7c6
minor
mtorabi59 Jun 12, 2026
1ef5787
add AIGM vs non-AIGM figure
mtorabi59 Jun 12, 2026
d4f0335
modify AIGM figures
mtorabi59 Jun 12, 2026
6285159
modify AIGM non-AIGM figure
mtorabi59 Jun 12, 2026
4ba2cb0
add new options for individual perf plot
mtorabi59 Jun 12, 2026
cebe04c
minor
mtorabi59 Jun 13, 2026
ff24dd8
minor
mtorabi59 Jun 13, 2026
ba10384
Merge branch 'mtorabi59:highthroughput_dFC' into highthroughput_dFC
kinichen Jun 13, 2026
5164a78
Add code to compute similarity between methods
Jun 4, 2026
b8c36a7
Add heatmaps and stats for similarity
kinichen Jun 5, 2026
6efdc22
Update feature similarity files
kinichen Jun 13, 2026
c4cff3b
improve lollipop figure
mtorabi59 Jun 14, 2026
3c305c2
minor
mtorabi59 Jun 14, 2026
ab3f5bb
minor
mtorabi59 Jun 14, 2026
b31d7f8
Update feature similarity compute and heatmap details
kinichen Jun 25, 2026
681574d
Merge wrong origin/highthroughput_dFC_local to correct local branch
kinichen Jun 26, 2026
ebc6b31
Merge branch 'mtorabi59:highthroughput_dFC' into highthroughput_dFC
kinichen Jun 26, 2026
df5f259
Merge branch 'neurodatascience:highthroughput_dFC' into highthroughpu…
mtorabi59 Jun 27, 2026
cc7e881
nmfstates bug
mtorabi59 Jun 27, 2026
b324d15
update README
mtorabi59 Jun 27, 2026
7b6ab58
clean similarity scripts
mtorabi59 Jun 27, 2026
507c35c
Merge pull request #52 from mtorabi59/highthroughput_dFC
mtorabi59 Jun 27, 2026
2c8ec03
Merge remote-tracking branch 'upstream/highthroughput_dFC' into hight…
kinichen Jun 28, 2026
494f0fe
Polish feature heatmaps (subplot) and change BOO algorithm similarity…
kinichen Jun 28, 2026
2c7a3d0
Ajout methode combine test
Achille-V Jun 30, 2026
088b72c
Supprime fichier artefact
Achille-V Jun 30, 2026
24bd101
Merge branch 'task_dFC enter a commit message to explain why this mer…
Achille-V Jul 6, 2026
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6 changes: 6 additions & 0 deletions .gitignore
Original file line number Diff line number Diff line change
Expand Up @@ -8,6 +8,12 @@ __pycache__

sample_data/

HT_LLM/similarity/*_results/

# HPC computing related
*.sh
slurm_out/

# build related
pydfc.egg-info
build
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