Add ToxinPred3 to compiled scorer runtime

[andymolecule]

Summary

• Adds ToxinPred3 1.4 and its real runtime dependency envelope to official_compiled_runtime.
• Pins the compiled image base, Debian Perl packages needed by MERCI/Time::HiRes, and hash-locked Python wheels for linux/amd64 and linux/arm64.
• Adds a compiled Docker smoke that runs the official compiled entrypoint with network disabled and proves toxinpred3 model 2 executes from a staged python-v1 program.

Scope

This is the public scorer-image follow-up for Agora ToxinPred3. It does not add OpenSol, AGGRESCAN, Boltz-2, new scorer methods, runtime profile ids, or Agora main digest rotation. Agora main should consume the main-branch publish artifact after this lands.

Proof

• npm ci
• bash scripts/run-scorer-tests.sh
• node scripts/check-scorer-containers.mjs
• npm test
• npm run check:replay-boundary
• npm run check:release-provenance
• npm run check:compiled-image
• npm run check:rdkit-image
• AGORA_MAIN_RUNTIME_MANIFEST_SCHEMA_PATH=/Users/changyuesin/Agora/packages/common/src/schemas/scorer-runtime-manifest.canonical.schema.json AGORA_MAIN_PROOF_BUNDLE_SCHEMA_PATH=/Users/changyuesin/Agora/packages/common/src/schemas/proof-bundle.canonical.schema.json npm run check:agora-main-schema-sync
• git diff --check