Add an InducedMetric class in mito/geometry#97

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Pawel024 wants to merge 72 commits into

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Commits on Mar 8, 2026

Commits on Mar 22, 2026

geometry: rename (euclidean) metric into {euclidean_metric} throughout
biancagi
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geometry: cleanup redundancy in {coordinates_t} definition in api
biancagi
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geometry: add concept of metric being compatible with a type of coordinates
biancagi
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Commits on Apr 27, 2026

fem: remove unused method {parametrization} of {IsoparametricSegmentP1}
biancagi
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geometry: new InducedMetric class with g, g_inv, volume_element, and gradient
Pawel024
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geometry: add support for forms in the InducedMetric class
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geometry: fix includes after renaming the induced directory to induced_metric
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tests/geometry: tests for the induced metric calculations for segment and triangle and D from 1 to 3
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geometry: fix volume form construction
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tests/geometry: add volume form checks to the InducedMetric test files
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geometry: replace the Induced Metric class with a static struct called pullback_metric
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tensor: add a factory for building matrices from column vectors
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manifolds: store a metric field instead of a volume form in manifolds and use this for integration with the Riemannian formula
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geometry: move pullback metric to the metric header
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tests/geometry: adapt the induced metric tests to the new api
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tests/geometry: add an induced metric test file for non-cartesian ambient metrics
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operators: initialize namespace with a gradient operator for both manifolds and submanifolds
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gitignore: ignore local and mdc files
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scripts: python plotting script to visualize spiral in spherical coords
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tests/geometry: add arc length integration test using manifold with pullback metric
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coordinates: publish the size of the underlying array in Coordinates.h
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geometry: remove template parameter ambient_metric in pullback_metric
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tensor: remove custom utility for building a matrix from column vectors and replace with pyre function
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manifolds: remove unused method {coordinates} of {Manifold} class
biancagi
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Commits on May 1, 2026

coordinates: publish the size of the underlying array in Coordinates.h

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biancagi
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Commits on May 3, 2026

tests/fem: adjust check of gradient vector in test gradient consistency
biancagi
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Commits on May 4, 2026

Commits on May 5, 2026

geometry: improve comment in {GeometricSimplex}
biancagi
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Commits on May 30, 2026

fem: redesign blocks and weakform integration
biancagi
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Commits on May 31, 2026

manifolds: major redesign of class {Manifold}
biancagi
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Commits on Jun 2, 2026

fem/elements: consistency edits across isoparametric elements, mostly in comments
biancagi
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Commits on Jun 22, 2026

Commits on Jun 25, 2026

Commits on Jul 1, 2026

Merge remote-tracking branch 'origin/manifold-integral-redesign' into induced-metric
Pawel024
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