MicrobiomeDB
R packages for reproducing and extending the methods, analyses, and data visualizations available through MicrobiomeDB.org
- 3 followers
- Philadelphia, PA
- https://microbiomeDB.org
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Repositories
Showing 10 of 17 repositories
- microbiomedb-mcp Public
MCP server for exploring MicrobiomeDB datasets and running analyses via R/Rserve
- mbioUtils Public
- biobakerymgx Public Forked from HoffLab/biobakerymgx
Read-preprocessing, taxonomic classification, functional classification, strain analysis, and pangenome analysis using bioBakery tools
- shotgun_metagenomics Public
A collection of shotgun metagenomics data sets intended for use with the mbio-airflow-dags repository
- mbio_airflow_dags Public
A collection of DAGs for running MicrobiomeDB data pipelines using Apache Airflow
- mbio_paper_analysis Public
- amplicon_sequencing Public
A collection of amplicon sequencing data sets intended for use with the mbio-airflow-dags repository
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