Skip to content

docs(citation): add the author's ORCID (0000-0002-3078-6652) to citation metadata - #34

Merged
hyperpolymath merged 1 commit into
mainfrom
chore/citation-orcid
Oct 1, 2026
Merged

hyperpolymath merged 1 commit into
mainfrom
chore/citation-orcid

Conversation

@hyperpolymath

@hyperpolymath hyperpolymath commented Oct 1, 2026 •

Copy link
Copy Markdown
Contributor

Adds the author's ORCID iD, 0000-0002-3078-6652, to this repo's citation metadata.

Part of an estate-wide rollout. The template's own 0000-0000 placeholder is fixed at source in hyperpolymath/rsr-template-repo#214. No licence fields were added or changed.

Red checks deferred to tracking issues

This PR edits only citation metadata. Each red check below is tracked in the linked issue, with its state on the base branch.

🤖 Generated with Claude Code

https://claude.ai/code/session_01B2ARtAVppZ7x7mVY5u6nAz

…ion metadata

- CITATION.cff: replaced orcid: "https://orcid.org/0000-0000-0000-0000" # Placeholder
- codemeta.json: inserted @id

https://orcid.org/0000-0002-3078-6652

Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
Claude-Session: https://claude.ai/code/session_01B2ARtAVppZ7x7mVY5u6nAz
Copilot AI balanced review requested due to automatic review settings October 1, 2026 06:01

Copilot AI left a comment

Copy link
Copy Markdown

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Copilot was unable to review this pull request because the user who requested the review has reached their quota limit.

@coderabbitai

coderabbitai Bot commented Oct 1, 2026 •

Copy link
Copy Markdown
Contributor

Review in Change Stack →

Navigate logical layers of code changes, visualize relationships, and explore their blast radius.

No actionable comments were generated in the recent review. 🎉

ℹ️ Recent review info
⚙️ Run configuration

Configuration used: Organization UI

Review profile: ASSERTIVE

Plan: Advanced

Run ID: 01b73f4f-12cd-4395-9994-a1a4d0c76478

📥 Commits

Reviewing files that changed from the base of the PR and between 7a87989 and a49c529.

📒 Files selected for processing (2)
  • CITATION.cff
  • codemeta.json

Included review availability: This review used your included allowance. Your plan provides up to 1 included review per hour; 0 remain after this review.

📜 Recent review details
⏰ Context from checks skipped due to timeout. (6)
  • GitHub Check: Dogfooding compliance summary
  • GitHub Check: Hypatia neurosymbolic scan
  • GitHub Check: check
  • GitHub Check: semgrep-cloud-platform/scan
  • GitHub Check: Analyze (javascript-typescript)
  • GitHub Check: Analyze (actions)
⚠️ CI failures not shown inline (16)

GitHub Actions: Guix Package Policy / 0_check.txt: docs(citation): add the author's ORCID (0000-0002-3078-6652) to citation metadata

Conclusion: failure

View job details

##[group]Run # Guix is the sole package manager estate-wide. Nix is BANNED.
 �[36;1m# Guix is the sole package manager estate-wide. Nix is BANNED.�[0m
 �[36;1mHAS_GUIX=$(find . -path ./.git -prune -o \( -name "*.scm" -o -name ".guix-channel" -o -name "guix.scm" \) -print 2>/dev/null | head -1)�[0m
 �[36;1mHAS_NIX=$(find . -path ./.git -prune -o -name "*.nix" -print 2>/dev/null | head -1)�[0m
 �[36;1m�[0m
 �[36;1m# Hard-fail on any Nix file — Nix is banned, migrate to Guix.�[0m
 �[36;1mif [ -n "$HAS_NIX" ]; then�[0m
 �[36;1m  echo "::error::Nix is banned estate-wide (Guix only). Remove flake.nix/*.nix and use guix.scm: $HAS_NIX"�[0m

GitHub Actions: Guix Package Policy / check: docs(citation): add the author's ORCID (0000-0002-3078-6652) to citation metadata

Conclusion: failure

View job details

##[group]Run # Guix is the sole package manager estate-wide. Nix is BANNED.
 �[36;1m# Guix is the sole package manager estate-wide. Nix is BANNED.�[0m
 �[36;1mHAS_GUIX=$(find . -path ./.git -prune -o \( -name "*.scm" -o -name ".guix-channel" -o -name "guix.scm" \) -print 2>/dev/null | head -1)�[0m
 �[36;1mHAS_NIX=$(find . -path ./.git -prune -o -name "*.nix" -print 2>/dev/null | head -1)�[0m
 �[36;1m�[0m
 �[36;1m# Hard-fail on any Nix file — Nix is banned, migrate to Guix.�[0m
 �[36;1mif [ -n "$HAS_NIX" ]; then�[0m
 �[36;1m  echo "::error::Nix is banned estate-wide (Guix only). Remove flake.nix/*.nix and use guix.scm: $HAS_NIX"�[0m

GitHub Actions: Estate Rules / 0_estate-rules.txt: docs(citation): add the author's ORCID (0000-0002-3078-6652) to citation metadata

Conclusion: failure

View job details

##[group]Run bash scripts/check-root-shape.sh .
 �[36;1mbash scripts/check-root-shape.sh .�[0m
 shell: /usr/bin/bash -e {0}
 ##[endgroup]
 FAIL: 35 root entries are not on the allowlist:
   - .ai-context.json
   - .claude/  (directory)
   - .guix-channel
   - .nojekyll
   - ABI-FFI-README.md
   - ABI-FFI-SYMLINKS.md
   - CODE_OF_CONDUCT.md
   - CONTRIBUTING.adoc
   - GEMINI.md
   - LICENSE.txt
   - Mustfile
   - PROGRESS-PHASE-1.md
   - README.md
   - RELEASE-NOTES-1.0.0.md
   - ROADMAP.adoc
   - ROADMAP.md
   - RSR_COMPLIANCE.adoc
   - RSR_OUTLINE.adoc
   - ada/  (directory)
   - architecture.adoc
   - codemeta.json
   - contractiles/  (directory)
   - cookbook.adoc
   - copilot-instructions.md
   - ffi/  (directory)
   - flake.lock
   - flake.nix
   - guix.scm
   - libs/  (directory)
   - license/  (directory)
   - ncl/  (directory)
   - opsm.toml
   - rsr-adapter.adb
   - rust/  (directory)
   - wiki/  (directory)
 Either move them into the appropriate subdirectory, or add a justified
 entry to .machine_readable/root-allow.txt.
 ##[error]Process completed with exit code 1.

GitHub Actions: Estate Rules / estate-rules: docs(citation): add the author's ORCID (0000-0002-3078-6652) to citation metadata

Conclusion: failure

View job details

##[group]Run bash scripts/check-root-shape.sh .
 �[36;1mbash scripts/check-root-shape.sh .�[0m
 shell: /usr/bin/bash -e {0}
 ##[endgroup]
 FAIL: 35 root entries are not on the allowlist:
   - .ai-context.json
   - .claude/  (directory)
   - .guix-channel
   - .nojekyll
   - ABI-FFI-README.md
   - ABI-FFI-SYMLINKS.md
   - CODE_OF_CONDUCT.md
   - CONTRIBUTING.adoc
   - GEMINI.md
   - LICENSE.txt
   - Mustfile
   - PROGRESS-PHASE-1.md
   - README.md
   - RELEASE-NOTES-1.0.0.md
   - ROADMAP.adoc
   - ROADMAP.md
   - RSR_COMPLIANCE.adoc
   - RSR_OUTLINE.adoc
   - ada/  (directory)
   - architecture.adoc
   - codemeta.json
   - contractiles/  (directory)
   - cookbook.adoc
   - copilot-instructions.md
   - ffi/  (directory)
   - flake.lock
   - flake.nix
   - guix.scm
   - libs/  (directory)
   - license/  (directory)
   - ncl/  (directory)
   - opsm.toml
   - rsr-adapter.adb
   - rust/  (directory)
   - wiki/  (directory)
 Either move them into the appropriate subdirectory, or add a justified
 entry to .machine_readable/root-allow.txt.
 ##[error]Process completed with exit code 1.

GitHub Actions: OpenSSF Compliance / 0_openssf-compliance.txt: docs(citation): add the author's ORCID (0000-0002-3078-6652) to citation metadata

Conclusion: failure

View job details

##[group]Run SECFILE=""
 �[36;1mSECFILE=""�[0m
 �[36;1m[ -f "SECURITY.md" ] && SECFILE="SECURITY.md"�[0m
 �[36;1m[ -f "SECURITY.adoc" ] && SECFILE="SECURITY.adoc"�[0m
 �[36;1m[ -f ".github/SECURITY.md" ] && SECFILE=".github/SECURITY.md"�[0m
 �[36;1m�[0m
 �[36;1mif [ -z "$SECFILE" ]; then�[0m
 �[36;1m  echo "::error::SECURITY.md (or SECURITY.adoc) is required for OpenSSF Best Practices"�[0m

GitHub Actions: OpenSSF Compliance / openssf-compliance: docs(citation): add the author's ORCID (0000-0002-3078-6652) to citation metadata

Conclusion: failure

View job details

##[group]Run SECFILE=""
 �[36;1mSECFILE=""�[0m
 �[36;1m[ -f "SECURITY.md" ] && SECFILE="SECURITY.md"�[0m
 �[36;1m[ -f "SECURITY.adoc" ] && SECFILE="SECURITY.adoc"�[0m
 �[36;1m[ -f ".github/SECURITY.md" ] && SECFILE=".github/SECURITY.md"�[0m
 �[36;1m�[0m
 �[36;1mif [ -z "$SECFILE" ]; then�[0m
 �[36;1m  echo "::error::SECURITY.md (or SECURITY.adoc) is required for OpenSSF Best Practices"�[0m

GitHub Actions: OpenSSF Compliance / openssf-compliance: docs(citation): add the author's ORCID (0000-0002-3078-6652) to citation metadata

Conclusion: failure

View job details

##[group]Run if [ ! -f "LICENSE" ] && [ ! -f "LICENSE.txt" ] && [ ! -f "LICENSE.md" ]; then
 �[36;1mif [ ! -f "LICENSE" ] && [ ! -f "LICENSE.txt" ] && [ ! -f "LICENSE.md" ]; then�[0m
 �[36;1m  echo "::error::LICENSE file is required for OpenSSF Best Practices"�[0m

GitHub Actions: OpenSSF Compliance / openssf-compliance: docs(citation): add the author's ORCID (0000-0002-3078-6652) to citation metadata

Conclusion: failure

View job details

##[group]Run if [ ! -f "CONTRIBUTING.md" ] && [ ! -f "CONTRIBUTING.adoc" ] \
 �[36;1mif [ ! -f "CONTRIBUTING.md" ] && [ ! -f "CONTRIBUTING.adoc" ] \�[0m
 �[36;1m   && [ ! -f ".github/CONTRIBUTING.md" ] && [ ! -f ".github/CONTRIBUTING.adoc" ]; then�[0m
 �[36;1m  echo "::error::CONTRIBUTING file is required for OpenSSF Best Practices"�[0m

GitHub Actions: OpenSSF Compliance / openssf-compliance: docs(citation): add the author's ORCID (0000-0002-3078-6652) to citation metadata

Conclusion: failure

View job details

##[group]Run if [ ! -f "README.md" ] && [ ! -f "README.adoc" ] && [ ! -f "README.rst" ] && [ ! -f "README.txt" ] && [ ! -f "README" ]; then
 �[36;1mif [ ! -f "README.md" ] && [ ! -f "README.adoc" ] && [ ! -f "README.rst" ] && [ ! -f "README.txt" ] && [ ! -f "README" ]; then�[0m
 �[36;1m  echo "::error::README file is required for OpenSSF Best Practices"�[0m

GitHub Actions: OpenSSF Compliance / openssf-compliance: docs(citation): add the author's ORCID (0000-0002-3078-6652) to citation metadata

Conclusion: failure

View job details

##[group]Run if [ ! -d ".machine_readable" ]; then
 �[36;1mif [ ! -d ".machine_readable" ]; then�[0m
 �[36;1m  echo "::error::.machine_readable/ directory is required"�[0m

GitHub Actions: OpenSSF Compliance / openssf-compliance: docs(citation): add the author's ORCID (0000-0002-3078-6652) to citation metadata

Conclusion: failure

View job details

##[group]Run if [ ! -f "CHANGELOG.md" ] && [ ! -f "CHANGELOG.adoc" ] && [ ! -f "CHANGES.md" ]; then
 �[36;1mif [ ! -f "CHANGELOG.md" ] && [ ! -f "CHANGELOG.adoc" ] && [ ! -f "CHANGES.md" ]; then�[0m
 �[36;1m  echo "::error::CHANGELOG.md is required for OpenSSF Best Practices"�[0m

GitHub Actions: OpenSSF Compliance / openssf-compliance: docs(citation): add the author's ORCID (0000-0002-3078-6652) to citation metadata

Conclusion: failure

View job details

##[group]Run bash scripts/check-no-placeholders.sh .
 �[36;1mbash scripts/check-no-placeholders.sh .�[0m
 shell: /usr/bin/bash -e {0}
 ##[endgroup]
 FAIL: 35 file(s) contain unfilled {{PLACEHOLDER}} tokens:
   - .github/.mailmap: {{AUTHOR_EMAIL_ALT}} {{AUTHOR_EMAIL}} {{AUTHOR}}
   - .github/CODEOWNERS: {{OWNER}}
   - .github/CODE_OF_CONDUCT.md: {{CONDUCT_EMAIL}} {{CONDUCT_TEAM}} {{CURRENT_YEAR}} {{FORGE}} {{OWNER}} {{PROJECT_NAME}} {{REPO}} {{RESPONSE_TIME}}
   - .github/CONTRIBUTING.md: {{FORGE}} {{MAIN_BRANCH}} {{OWNER}} {{REPO}}
   - .github/FUNDING.yml: {{OWNER}}
   - .github/GOVERNANCE.md: {{CURRENT_YEAR}} {{OWNER}} {{PROJECT_NAME}}
   - .github/MAINTAINERS: {{AUTHOR_EMAIL}} {{AUTHOR}}
   - .github/SECURITY.md: {{CURRENT_YEAR}} {{OWNER}} {{PROJECT_NAME}} {{REPO}} {{SECURITY_EMAIL}}
   - .github/SUPPORT: {{OWNER}} {{REPO}}
   - .github/copilot-instructions.md: {{AUTHOR_EMAIL}} {{AUTHOR}} {{CURRENT_YEAR}} {{OWNER}}
   - .github/settings.yml: {{DESCRIPTION}} {{REPO}}
   - .machine_readable/bot_directives/methodology.a2ml: {{PROJECT_UNIQUE_STRENGTH}}
   - .machine_readable/configs/stapeln.toml: {{REGISTRY}} {{SERVICE_NAME}}
   - .machine_readable/descriptiles/anchors/ANCHOR.a2ml: {{PROJECT_DOMAIN}} {{PROJECT_KIND}}
   - .machine_readable/self-validating/examples/project-metadata.k9.ncl: {{AUTHOR_ORG}}
   - .well-known/consent-required.txt: {{PROJECT_NAME}}
   - .well-known/provenance.json: {{CREATED_DATE}} {{UPDATED_DATE}} {{VERSION}}
   - .well-known/security.txt: {{SECURITY_EMAIL}}
   - AFFIRMATION.adoc: {{MAIN_BRANCH}}
   - CODE_OF_CONDUCT.md: {{CONDUCT_EMAIL}} {{CONDUCT_TEAM}} {{RESPONSE_TIME}}
   - SECURITY.md: {{PGP_KEY_URL}} {{WEBSITE}}
   - container/Containerfile: {{LICENSE}} {{PORT}} {{SERVICE_NAME}}
   - container/README.adoc: {{SERVICE_NAME}}
   - container/compose.yaml: {{PORT}} {{REGISTRY}} {{SERVICE_NAME}}
   - container/entrypoint.sh: {{PORT}} {{SERVICE_NAME}}
   - container/stapeln/.gatekeeper.yaml: {{SERVICE_NAME}}
   - container/stapeln/compos...

GitHub Actions: Static Analysis Gate / 2_Hypatia neurosymbolic scan.txt: docs(citation): add the author's ORCID (0000-0002-3078-6652) to citation metadata

Conclusion: failure

View job details

##[group]Run set +e
 �[36;1mset +e�[0m
 �[36;1mHYPATIA_FORMAT=json "$HOME/hypatia/hypatia-cli.sh" scan . --exit-zero > hypatia-findings.json�[0m
 �[36;1mHYP_EXIT=$?�[0m
 �[36;1mset -e�[0m
 �[36;1m�[0m
 �[36;1m# --exit-zero is Hypatia's own documented CI recipe (lib/hypatia/cli.ex),�[0m
 �[36;1m# for exactly this case: "use in CI when a downstream step gates on�[0m
 �[36;1m# severity counts". Findings go to stdout, the one-line summary to�[0m
 �[36;1m# stderr, and the process exits 0 unless the SCANNER itself failed.�[0m
 �[36;1m#�[0m
 �[36;1m# Do NOT redirect stderr into the payload with `2>&1`: that folds the�[0m
 �[36;1m# summary line into the JSON, so every parse fails, the old `[]`�[0m
 �[36;1m# fallback substituted a clean result, CRITICAL was always 0, and the�[0m
 �[36;1m# gate below could never fire on any input. Keep stderr on the log.�[0m
 �[36;1mif [ "$HYP_EXIT" -ne 0 ]; then�[0m
 �[36;1m  echo "::error::Hypatia scanner execution failed with exit ${HYP_EXIT}"�[0m

GitHub Actions: Static Analysis Gate / Hypatia neurosymbolic scan: docs(citation): add the author's ORCID (0000-0002-3078-6652) to citation metadata

Conclusion: failure

View job details

##[group]Run set +e
 �[36;1mset +e�[0m
 �[36;1mHYPATIA_FORMAT=json "$HOME/hypatia/hypatia-cli.sh" scan . --exit-zero > hypatia-findings.json�[0m
 �[36;1mHYP_EXIT=$?�[0m
 �[36;1mset -e�[0m
 �[36;1m�[0m
 �[36;1m# --exit-zero is Hypatia's own documented CI recipe (lib/hypatia/cli.ex),�[0m
 �[36;1m# for exactly this case: "use in CI when a downstream step gates on�[0m
 �[36;1m# severity counts". Findings go to stdout, the one-line summary to�[0m
 �[36;1m# stderr, and the process exits 0 unless the SCANNER itself failed.�[0m
 �[36;1m#�[0m
 �[36;1m# Do NOT redirect stderr into the payload with `2>&1`: that folds the�[0m
 �[36;1m# summary line into the JSON, so every parse fails, the old `[]`�[0m
 �[36;1m# fallback substituted a clean result, CRITICAL was always 0, and the�[0m
 �[36;1m# gate below could never fire on any input. Keep stderr on the log.�[0m
 �[36;1mif [ "$HYP_EXIT" -ne 0 ]; then�[0m
 �[36;1m  echo "::error::Hypatia scanner execution failed with exit ${HYP_EXIT}"�[0m

GitHub Actions: Static Analysis Gate / Hypatia neurosymbolic scan: docs(citation): add the author's ORCID (0000-0002-3078-6652) to citation metadata

Conclusion: failure

View job details

##[group]Run # Findings carry no `.message` (keys: action,file,line,reason,rule_module,
 �[36;1m# Findings carry no `.message` (keys: action,file,line,reason,rule_module,�[0m
 �[36;1m# severity,type), so every annotation read "null". `.file` is an absolute�[0m
 �[36;1m# runner path, which GitHub cannot anchor to the diff, so it is made�[0m
 �[36;1m# workspace-relative here.�[0m
 �[36;1mjq -r --arg ws "$GITHUB_WORKSPACE" '.[] | select(.file != null) |�[0m
 �[36;1m  (.file | ltrimstr($ws + "/")) as $f |�[0m
 �[36;1m  (.reason // .message // .type // "finding") as $m |�[0m
 �[36;1m  if .severity == "critical" then�[0m
 �[36;1m    "::error file=\($f),line=\(.line // 1)::[hypatia] \($m)"�[0m

GitHub Actions: Static Analysis Gate / Hypatia neurosymbolic scan: docs(citation): add the author's ORCID (0000-0002-3078-6652) to citation metadata

Conclusion: failure

View job details

##[group]Run echo "::error::Hypatia found 1 critical security issue(s) — blocking merge"
🔇 Additional comments (2)
CITATION.cff (1)

6-6: LGTM!

codemeta.json (1)

20-20: LGTM!


📝 Summary

Summary by CodeRabbit

  • Documentation
    • Updated the author’s ORCID identifier in the citation and project metadata.

Walkthrough

The author’s ORCID identifier is now recorded in CITATION.cff and codemeta.json.

Changes

Author ORCID metadata

Layer / File(s) Summary
Record the author ORCID
CITATION.cff, codemeta.json
CITATION.cff replaces the placeholder ORCID with 0000-0002-3078-6652. codemeta.json adds the corresponding ORCID URL to the author record.

Priority: ⬇️ Low

Estimated code review effort: 1 (Trivial) | ~3 minutes

Change: Other

Suggested reviewers: {{owner}}

Merge Risk: ⚪ Minimal · up to a49c5

The metadata files now consistently record the same ORCID, and no concrete issue requiring a change before merge is established.

Architecture Summary

Architecture risk: 🔵 Low · up to a49c5

The change affects 2 systems.

Changed systems: CITATION.cff, codemeta.json

Architecture concerns
No architecture-level concerns identified.

Review details

Systems and components

  • observed — CITATION.cff (service) was modified; 1 changed file maps to changed impact.
  • observed — codemeta.json (service) was modified; 1 changed file maps to changed impact.

Before / after behavior

  • observed — Modified behavior in CITATION.cff: The author’s ORCID value changed from the placeholder 0000-0000-0000-0000 to 0000-0002-3078-6652.
  • observed — Modified behavior in codemeta.json: Added an @id ORCID identifier to the author record.
🚥 Pre-merge checks | ✅ 4 | ❌ 1

❌ Failed checks (1 warning)

Check name Status Explanation Resolution
Description check ⚠️ Warning The description explains the ORCID changes, identifies both modified files, and provides relevant rollout context. It does not follow the repository template because it omits the required RSR Quality … Add the template sections. Complete the RSR Quality Checklist, state how the changes were tested, and add screenshots or terminal output if applicable. Keep the existing summary and change details.
✅ Passed checks (4 passed)
Check name Status Explanation
Docstring Coverage ✅ Passed No functions found in the changed files to evaluate docstring coverage. Skipping docstring coverage check. Docstring coverage is scoped to functions touched by this diff. Analyzed 0 functions across 0…
Linked Issues check ✅ Passed Check skipped because no linked issues were found for this pull request.
Out of Scope Changes check ✅ Passed Check skipped because no linked issues were found for this pull request.
Title check ✅ Passed The title clearly identifies the main change: adding the author’s ORCID to citation metadata. It is specific and related to both modified files.
Full details: Description check

Explanation

The description explains the ORCID changes, identifies both modified files, and provides relevant rollout context. It does not follow the repository template because it omits the required RSR Quality Checklist, Testing, and Screenshots sections.

  • Fix all pre-merge checks with AI
✨ Finishing Touches 💡 1
🛠️ Fix failing CI checks 💡
  • Commit to this branch
  • Create a new PR
  • Autopilot · Keep fixing CodeRabbit findings and required CI, and resolving merge conflicts

Autopilot is currently an internal CodeRabbit preview.


Thanks for using CodeRabbit! It's free for OSS, and your support helps us grow. If you like it, consider giving us a shout-out.

❤️ Share

A rabbit checks the citation line,
Then adds an ORCID, neat and fine.
The metadata records it too,
With matching digits, clear and true.
The rabbit hops beneath the moon,
And files the update before noon.

Comment @coderabbitai help to get the list of available commands.

@hyperpolymath
hyperpolymath merged commit 787507e into main Oct 1, 2026
25 of 29 checks passed
@hyperpolymath
hyperpolymath deleted the chore/citation-orcid branch October 1, 2026 13:50
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

2 participants