Only upload simularium file once#446
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ascibisz merged 5 commits intofeature/server-passed-recipe-jsonfrom Feb 4, 2026
Merged
Only upload simularium file once#446ascibisz merged 5 commits intofeature/server-passed-recipe-jsonfrom
ascibisz merged 5 commits intofeature/server-passed-recipe-jsonfrom
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rugeli
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Feb 3, 2026
| sub_folder_name=sub_folder, | ||
| region_name="us-west-2", | ||
| ) | ||
| initialized_handler = handler( |
rugeli
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looks good to me! since store_matadata and upload_result_metadata are being removed next. the changes in here are very clean and well scoped!
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Problem
We're currently uploading the simularium results file twice for packings run on the cellpack server, once on its own to the /simularium subdirectory and once with all the output files to the /runs subdirectory. This is redundant and silly!
Link to story or ticket
Solution
When we're running a packing on the cellpack server, skip the step where we upload the simularium file on its own. When we upload the results directory, keep track of the path for the simularium file within that and upload that to firebase, along with the output files directory path.