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Releases: labstructbioinf/DeepCoil

v2.0.2

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@jludwiczak jludwiczak released this 01 Mar 17:54
ca16e92
  • Fixed installation issues.

v2.0.1

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@jludwiczak jludwiczak released this 30 Nov 14:36

Updated DeepCoil2 neural network weights.

v2.0

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@jludwiczak jludwiczak released this 14 Nov 17:32
  • Retrained with the updated dataset based on SamCC-Turbo labels.
  • Faster inference time by applying SeqVec embeddings instead of psiblast profiles.
  • Heptad register prediction (a and d core positions).
  • No maximum sequence length limit.
  • Convenient interface for using DeepCoil within python scripts.
  • Automated peak detection for improved output readability.
  • Simplified installation with pip.

v1.1

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@jludwiczak jludwiczak released this 07 Aug 10:19

Added custom output filtering options -min_residue_score and -min_segment_length.

v1.0

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@jludwiczak jludwiczak released this 07 Aug 09:33
b2f1e54

Initial release - corresponds to the version presented in the original paper DOI:10.1093/bioinformatics/bty1062