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911fb68
on #scripts_130_ian: first mods on setenv.bash made, and file scripts…
carlosrenatosouza2 Oct 8, 2025
64baa56
#833: new branch created manually, new host ian detec implemented in …
carlosrenatosouza2 Oct 8, 2025
3aee442
on833:
netosylvio Oct 13, 2025
c782d06
on833:
netosylvio Oct 13, 2025
34949e5
on #833: first testing in my area
carlosrenatosouza2 Oct 14, 2025
fc44a9a
on #833: files permission ajusdtment
carlosrenatosouza2 Oct 14, 2025
8125f8c
on #833: file stenv.bash permission double check
carlosrenatosouza2 Oct 14, 2025
10b862e
on #833: adjusting DIR_SCRIPTS and MONANDIR variables with the sed co…
egkhamis Oct 14, 2025
1f79edd
on #833: fixing merge problems.
egkhamis Oct 14, 2025
c955ea8
on #833: I threw out some comments
carlosrenatosouza2 Oct 14, 2025
0902140
on #833: make_degrib.bash adjusted for running at PBS_ian system.
egkhamis Oct 15, 2025
a66148a
on #833: make_initatmos.bash adjusted for running at PBS_ian system.
egkhamis Oct 15, 2025
04ea4e0
on #833: removing exit command in run_model.bash
egkhamis Oct 15, 2025
46d21e2
on #833: run_post.bash adjusted for running at PBS_ian system. make_t…
egkhamis Oct 15, 2025
d633f0b
on833:
netosylvio Oct 15, 2025
445e8c1
on833:
netosylvio Oct 15, 2025
27a7240
on833
netosylvio Oct 15, 2025
b81d734
on833
netosylvio Oct 16, 2025
adc491c
on #833: fixing pre-processing to work in both, PBS and SLURM, systems.
egkhamis Oct 17, 2025
cee1192
on #833: fixing initial conditions finding to work in both, PBS and S…
egkhamis Oct 17, 2025
b7e60ba
“on
egkhamis Oct 17, 2025
679c413
on833
netosylvio Oct 17, 2025
3ca40ca
on833
netosylvio Oct 17, 2025
4acd270
on #833: fix on setenv.bash , 2.pre_processing.bash and make_static.bash
netosylvio Oct 17, 2025
bbb7ec4
on #833: adjusting post processing to work in both, PBS and SLURM, sy…
egkhamis Oct 17, 2025
1f53f68
on #833: adjusting some paths for ian operation.
egkhamis Oct 17, 2025
f7072de
“on
egkhamis Oct 18, 2025
9e1cc71
on #844: adjusting the PBS scripts to deal with openmp and the 10km r…
egkhamis Oct 20, 2025
bc7543f
on #844: adjusting the PBS scripts to deal with openmp and the 10km r…
egkhamis Oct 20, 2025
96e8471
on #844: make_degrib now uses gfs data from /oper/dados/ioper/tempo/G…
egkhamis Oct 21, 2025
6d2748f
#833:
carlosrenatosouza2 Oct 21, 2025
7fa27c4
on #844: adding configuration for running the model with 3 Km of reso…
egkhamis Oct 22, 2025
66c842b
on #833: source the environment again (. setenv.bash) to avoid initia…
egkhamis Oct 22, 2025
ab3f568
on #833: many little modfications:
carlosrenatosouza2 Oct 28, 2025
89044e2
on #833:
carlosrenatosouza2 Oct 28, 2025
3e40600
on #833:
carlosrenatosouza2 Oct 29, 2025
6f63dcf
on #833: return of export DIR_SCRIPTS=/lustre/projetos/monan_adm/carl…
carlosrenatosouza2 Oct 31, 2025
48196b2
on 833: umask 022 added in all scripts.
carlosrenatosouza2 Oct 31, 2025
98a6c1a
on 833: umaks removed from setenvs scripts, mostly inside stools dir.…
carlosrenatosouza2 Oct 31, 2025
a1e69d9
on #833:
carlosrenatosouza2 Oct 31, 2025
b5e8043
on833
netosylvio Nov 3, 2025
b8479c7
fixed setenv call on make-all.bash , fixed 4.run_post for variable cu…
netosylvio Nov 11, 2025
f2f0670
#855: Including configurations for 30 and 60km of resolution.
egkhamis Nov 25, 2025
b92cdc6
#854: including io_type=pnetcdf,cdf5 in the streams' templates.
egkhamis Nov 28, 2025
6e36800
#854: including environmental configurations for gnu compiler in the …
egkhamis Nov 28, 2025
885f02e
#854: including environmental configurations for gnu compiler in the …
egkhamis Nov 28, 2025
c88f43c
#854: removing PIO2 compilation to preserve compatibility with the SL…
egkhamis Nov 28, 2025
6269f99
#854: including environmental configurations for gnu compiler in the …
egkhamis Nov 28, 2025
d17697d
#854: convert_mpas compilation resolved to work at Egeon and Jaci
egkhamis Nov 28, 2025
502ae07
#854: including environmental configurations for gnu compiler in the …
egkhamis Dec 1, 2025
79b2a9a
Updates for the new version - 1.4.0; Compatibility with MONAN 1.4.3-r…
joaomas Jan 22, 2026
ca7ae60
updated 0.run_all.bash to open the 1.install line by default
joaomas Jan 22, 2026
8d4b125
Merge branch 'feature/scripts-854-NF' into develop
joaomas Jan 22, 2026
b8afe34
issue922 MPICH REPORT commented
dmassaru Feb 27, 2026
6f8359c
issue-922: rename model.bash.e/model.bash.o to model.bash.e.JOBID\mod…
dmassaru Mar 2, 2026
b7588fc
issue-922: Fix 'No such file or directory Error'
dmassaru Mar 2, 2026
2f2bf23
issue-922: MPICH REPORT commented
dmassaru Mar 7, 2026
420421a
rename degrib.e/degrib.o to degrib.e.JOBID/degrib.o.JOBID, adds read …
dmassaru Mar 7, 2026
37271c6
rename initatmos.e/initatmos.bash.o to initatmos.bash.e.JOBID/initatm…
dmassaru Mar 7, 2026
cc4f4ee
rename static.e/static.bash.o to static.bash.e.JOBID/static.bash.o.JO…
dmassaru Mar 7, 2026
00c6b2d
rename PostAtmos_node.X.e/PostAtmos_node.X.o to PostAtmos_node.X.e.JO…
dmassaru Mar 7, 2026
9460833
Added support for Cray XD2000 compiler
dmassaru Mar 10, 2026
7c24264
Added support for Cray XD2000 compiler
dmassaru Mar 10, 2026
7f753a7
issue-922: MPICH REPORT commented
dmassaru Mar 10, 2026
39a7ba8
Setting the intel compiler as default
dmassaru Mar 10, 2026
c8af6f4
issue-934: adds read permission to logs/log.init_atmosphere.*
dmassaru Mar 17, 2026
e24e90e
issue-934: adjust config_smdiv to 0.15
dmassaru Mar 17, 2026
fd00cfb
issue-934: assign MONANDIR to itself
dmassaru Mar 17, 2026
3c7ec73
Merge branch 'feature/scripts-922-NF' into develop
marcelopaivaramos Mar 26, 2026
db4bcf4
new features: regional mode and ERA5
joaomas Jun 13, 2026
8dc64ed
fixed regional feature
joaomas Jun 16, 2026
69fa5cc
fixed regional feature and ERA5 - issue #1001 #956
joaomas Jul 1, 2026
3ceb8b8
restore make_degrib.bash to make_degrib_GFS.bash
joaomas Jul 1, 2026
9e50092
Rename ERA5 to ERA due to a convert_mpas restriction in filename - Ti…
joaomas Jul 2, 2026
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20 changes: 12 additions & 8 deletions README.md
Original file line number Diff line number Diff line change
@@ -1,10 +1,15 @@
# MONAN - Model for Ocean-laNd-Atmosphere PredictioN
# Scripts CD-CT (Continuos Deployment & Continuous Testing) for MONAN (Model for Ocean-laNd-Atmosphere PredictioN)

### *Continuous Deployment & Continuous Testing (CD-CT) for MONAN at Egeon*
## History

This folder aims to create a version for testing MONAN with GFS at Egeon.
**Develop**

## History: ##
- New functionality for Regional simulations.
- Option to use ERA5 data as an initial condition.

**1.4.0**
- Compatibility with MONAN 1.4.3-rc.
- Support for multi-environment: 'Jaci' supercomputer (intel and gnu compilers and PBS scheduler) and 'Egeon' cluster (gnu compiler and SLURM scheduler).

**1.3.0**
- This version was created to work in operational runs.
Expand Down Expand Up @@ -62,7 +67,7 @@ This folder aims to create a version for testing MONAN with GFS at Egeon.
- Grouping all variables with one pressure level to only one variable with all levels.
- Defined default version of MONAN-Model (0.5.0) and convert_mpas (0.1.0) in the installation step.

### Implementation at Egeon:
## Get Started

**Getting the scritps:**

Expand Down Expand Up @@ -91,8 +96,8 @@ You will need to execute only 6 steps scripts, so you can run the Atmospheric MO

Default values:
~~~
<OPTIONAL_tag_or_branch_name_MONAN-Model> = "1.0.0"
<OPTIONAL_tag_or_branch_name_Convert-MPAS> = "1.0.0"
<OPTIONAL_tag_or_branch_name_MONAN-Model> = "1.4.3-rc"
<OPTIONAL_tag_or_branch_name_Convert-MPAS> = "1.2.0"
~~~

- This first step will create a standart diretories structures for work:
Expand All @@ -114,7 +119,6 @@ Where:
- `dataout\Pre\<YYYYMMDDHH>` will contain all the output files from the pre-processing phase, mostly are all the initial condition for run the MONAN;
- `dataout\Model\<YYYYMMDDHH>` will contain all the output files from the MONAN model;
- `dataout\Post\<YYYYMMDDHH>` will contain all the output files from the post-processing phase of the MONAN;
- `dataout\Prods\<YYYYMMDDHH>` will contain all the output files from the products generated, graphics, derivated variables, peace of domain, etc.

After running the first step, it will clone the MONAN model from your fork repo in a `source` diretory.

Expand Down
2 changes: 1 addition & 1 deletion VERSION.txt
100644 → 100755
Original file line number Diff line number Diff line change
@@ -1 +1 @@
1.3.0
1.4.0
64 changes: 0 additions & 64 deletions scripts.pomerode/0.run_all_first_time.bash

This file was deleted.

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