GitHub - hermann-p/segemehl-visual: segemehl plot tool · GitHub

Name		Name	Last commit message	Last commit date
report		report
talk		talk
CMakeLists.txt		CMakeLists.txt
chipboard-cli.cpp		chipboard-cli.cpp
chipboard.kdev4		chipboard.kdev4
genome.cpp		genome.cpp
genome.h		genome.h
linplot2.cpp		linplot2.cpp
linplot2.h		linplot2.h
lockfreequeue.h		lockfreequeue.h
main.cpp		main.cpp
plotchromosome2.cpp		plotchromosome2.cpp
plotchromosome2.h		plotchromosome2.h
readcontainer.cpp		readcontainer.cpp
readcontainer.h		readcontainer.h
readme.md		readme.md
tests.cpp		tests.cpp
utils.cpp		utils.cpp
utils.h		utils.h
vplot2.cpp		vplot2.cpp
vplot2.h		vplot2.h

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This project aims to provide automatic plotting for short read alignments from .sam files created with the segemehl tool.

Created during practical bioinformatics II course, held by the Spang group at Universität Regensburg.

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segemehl plot tool

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