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Release/v2.0.7 -> develop - #109
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* fix: Update vignette and docs for BRCore 2.0.2 CRAN submission * chore: remove parallel dependencies and clean up docs for CRAN v2.0.2 - Removal of "multiple" rarefaction concept. Replace by "multiple iterations" * docs: update cran-comments.md for v2.0.2 resubmission * Increment version number to 2.0.2 * docs: expand package description with methodology references and citations * docs: improve documentation formatting and examples across neutral model functions * docs: improve examples, add `seealso` links, and remove \donttest wrappers * chore: Remove parallel computing utilities from pkgdown reference and fix OTU table formatting * docs: Add `switchgrass_core` precomputed dataset and refactor examples to use it. Updated citation style to APA 7th edition. * docs: update `seealso` links and remove global warning suppression in `sncm.fit()` * fix: update DOI links to use canonical doi: format in docs and DESCRIPTION * docs: add switchgrass_core to pkgdown reference * chore: update CRAN comments for v2.0.3 resubmission and add Quarto to .gitignore * Increment version number to 2.0.3 * fix: Suppress warnings from `dnorm` calls in `sncm.fit` likelihood functions * docs: Add `scnm.fit()` to README function list * Update release notes * Increment version number to 2.0.4 * fix: typo `scnm.fit` → `sncm.fit` and use HTTPS for pkgdown URL * fix: Quote 'BRCore' in DESCRIPTION and fix README badge links * Increment version number to 2.0.4.9000
- Relaxed version requirements for `phyloseq` and `stats4`.
- Relaxed version requirements for `phyloseq` and `stats4`.
jibarozzo
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Gian77
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May 20, 2026
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@jibarozzo Seems all good! Did you also check the typo(s), I guess was in the vignette?
Great work I am going to approve it.
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Yes, I checked the typos. They were in the README, not the vignette. |
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This is a duplicate of #108 to update
developwith the latest release fixes/changes.This brings changes from release/v2.0.5, which address MRA reviewers' suggestions and fix documentation and CI issues from release/v2.0.7. Both releases made it to CRAN. The v2.0.6 failed to make it to CRAN due to invalid URLs in NEWS.md. I upgraded to the development version, but aside from that, it's the same as the CRAN version.
BRCore 2.0.7
2026-05-19
BRCore 2.0.5
2026-05-18
Bug Fixes
Relaxed version requirements for phyloseq and stats4 to improve compatibility.
5ba7a7c Added biocViews field to DESCRIPTION to allow installation of Bioconductor dependencies via install.packages().
40d79e4 Fixes to quote 'BRCore' in DESCRIPTION and typo fix of sncm.fit in _pkgdown.yaml
Refactoring
Documentation