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[Question] - What happens when assemblies with bona fide linear chromosomes are used as input?

Status: Open.

#105 In gbouras13/dnaapler;

· jolespin opened on Jun 29, 2026

The top terL MMseqs2 hit did not have a MMseqs2 alignment beginning with a valid start codon M, V or L.

Status: Open.

#93 In gbouras13/dnaapler;

· MonicaSteffi opened on Jan 24, 2025

Feature request: Support for linear bacterial replicons?

enhancementNew feature or requestNew feature or request

Status: Open.

#82 In gbouras13/dnaapler;

· tuspjo opened on Oct 21, 2024

Support reorientation of as many contigs as possible

Status: Open.

#80 In gbouras13/dnaapler;

· schorlton-bugseq opened on Aug 12, 2024

min and max length criteria

Status: Open.

#71 In gbouras13/dnaapler;

· sejmodha opened on Jan 24, 2024