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Pull requests: galaxyproject/iwc

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Pull requests list

Update metagenomic genes catalogue to 1.3
#1301 opened Jul 17, 2026 by hugolefeuvre Collaborator Loading…
4 of 13 tasks
7
Add correlation of samples on peaks workflow
#1300 opened Jul 15, 2026 by OEAdebayo Loading…
23
se-wgs-variation: convert asserts to list form (blocked by bcftools concat SIGSEGV)
#1277 opened Jul 10, 2026 by jmchilton Member • Draft
2 tasks
3
Updating workflows/read-preprocessing/short-read-qc-trimming from 0.3 to 0.4
#1271 opened Jul 6, 2026 by gxydevbot Contributor Loading…
1
Updating workflows/microbiome/pathogen-identification/allele-based-pathogen-identification from 0.1.4 to 0.1.5
#1270 opened Jul 6, 2026 by gxydevbot Contributor Loading…
Updating workflows/metabolomics/gcms-metams from 0.2 to 0.3
#1269 opened Jul 6, 2026 by gxydevbot Contributor Loading…
Add SameStr workflow
#1257 opened Jun 19, 2026 by xens25 Loading…
3 of 12 tasks
58
Updating workflows/genome_annotation/lncRNAs-annotation from 0.1 to 0.2
#1253 opened Jun 8, 2026 by gxydevbot Contributor Loading…
1
Updating workflows/imaging/histological-staining-area-quantification from 0.1.1 to 0.1.2
#1250 opened Jun 1, 2026 by gxydevbot Contributor Loading…
1
Updating workflows/VGP-assembly-v2/post-curation-processing from 0.1 to 0.2
#1249 opened Jun 1, 2026 by gxydevbot Contributor Loading…
5
Add PGGB pangenome build workflow (comparative_genomics)
#1246 opened May 27, 2026 by nekrut Collaborator • Draft
4 of 5 tasks
21
VGP - Creation of a workflow to fetch related species genomes
#1237 opened May 13, 2026 by Delphine-L Contributor • Draft
12 tasks
Add nf-core/eager style ancient DNA (aDNA) analysis workflow
#1234 opened May 9, 2026 by mertydn Loading…
3 of 12 tasks
74
VGP Precuration - Creation of the workflow to generate jbrowse2 instances with related species
#1233 opened May 7, 2026 by Delphine-L Contributor • Draft
12 tasks
VGP 6 - Updates and fix awk expression that was breaking
#1232 opened May 7, 2026 by Delphine-L Contributor • Draft
12 tasks
1
Updating workflows/VGP-assembly-v2/hi-c-contact-map-for-assembly-manual-curation from 2.4 to 2.5
#1231 opened May 4, 2026 by gxydevbot Contributor Loading…
4
VGP precuration - version 3.0
#1230 opened Apr 30, 2026 by Delphine-L Contributor • Draft
12 tasks
Add DNA sequence classification workflow using LSTM (RNN) neural network from Galaxy ML tool suite
#1229 opened Apr 28, 2026 by anuprulez Member • Draft
3 of 12 tasks
67
Updating workflows/variant-calling/ploidy-aware-genotype-calling from 0.1.2 to 0.1.3
#1227 opened Apr 27, 2026 by gxydevbot Contributor Loading…
5
Updating workflows/comparative_genomics/hyphy from 0.1 to 0.2
#1223 opened Apr 27, 2026 by gxydevbot Contributor Loading…
4
Add viral detection from bulk metagenomes
#1222 opened Apr 26, 2026 by SantaMcCloud Contributor Loading…
3 of 12 tasks
25
Updating workflows/VGP-assembly-v2/Mitogenome-assembly-VGP0 from 0.2.2 to 0.2.3
#1211 opened Apr 20, 2026 by gxydevbot Contributor Loading…
1
wip: lexicmap and logan workflows w download
#1210 opened Apr 17, 2026 by d-callan Collaborator • Draft
3 of 12 tasks
7
Update bacterial assembly WF - change shovill assembler
#1209 opened Apr 15, 2026 by hugolefeuvre Collaborator • Draft
3 of 12 tasks
2
Updating workflows/proteomics/clinicalmp/clinicalmp-quantitation from 0.1 to 0.2
#1203 opened Apr 6, 2026 by gxydevbot Contributor Loading…
1
ProTip! Updated in the last three days: updated:>2026-07-16.