Usage

Please see the pages listed below for tutorials for each of the fragmentomic features implemented by FinaleToolkit. Refer to our project website for detailed API documentation and CLI man pages.

We have designed the tutorials below to be feasible for a decently performant PC.

• frag-length-bins
• frag-length-intervals
• coverage
• cleavage-profile
• end-motifs
• interval-end-motifs
• wps
• adjust-wps
• mds
• regional-mds
• gap-bed
• delfi
• filter-file
• agg-bw