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A pipeline for processing CCS reads of AMF to ASVs using DADA2

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AMF communities under simulated short-term drought in a long-term farming experiment with organic and conventional management practices.

This repository contains all the codes and other documents related to the processing of CCS reads to ASVs using DADA2

- Scripts

This folder contains scripts related to bioinformatic analyses with DADA2 (script_bioinformatics) and statistics analyses (script_brms, script_multivariate_stats).

- Data

This folder contains data generated through bioinformatics and statistics; fasta, rds and csv files.

- Results

This folder contains results.

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A pipeline for processing CCS reads of AMF to ASVs using DADA2

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