[ajianaz]

What

Copy the docs fixes that only exist on main into develop: docs/cli-reference.md (+7), docs/code-intelligence.md (+23/-10) and docs/configuration.md (+25/-6). They come from three docs-only commits made on main (a2056ab full audit fixes, afa5c15, 80327d0 impact-depth guidance) that develop never received. After this PR the whole tree of develop equals main (git diff origin/main is empty).

Why

develop has linear history required, so main cannot be merged back into it with a merge commit; a content sync by PR is the only way. Without it the next develop to main release would carry stale docs and the two branches keep drifting.

Testing

• Verified that develop did not touch these three files since the common ancestor, so nothing is overwritten; main's copies already contain the docs edits from this release (agent mode rows, include_tests, max_findings 50).
• Spot-checked against the code: bundling defaults max_chars_per_group: 60000 and strategy: smart | flat match src/engine/bundling/types.rs.
• After the change git diff --stat origin/main shows no differences. Docs only; CI includes the website build.