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Pull requests: christiaanjs/treeflow

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Pull requests list

Add tree normalizing flow for phylogenetic variational inference
#116 opened Aug 3, 2026 by christiaanjs Owner Loading…
Implement VBPI subsplit Bayesian network topology inference
#115 opened Jul 17, 2026 by christiaanjs Owner Loading…
Full-covariance Gaussian for simplex-constrained variables
#114 opened Jul 11, 2026 by alexeid Collaborator Loading…
Bump idna from 3.11 to 3.15 in /dev dependencies Pull requests that update a dependency file python Pull requests that update python code
#97 opened May 19, 2026 by dependabot Bot Loading…
Bump urllib3 from 2.6.3 to 2.7.0 in /dev dependencies Pull requests that update a dependency file python Pull requests that update python code
#96 opened May 11, 2026 by dependabot Bot Loading…
Bump mistune from 3.2.0 to 3.2.1 in /dev dependencies Pull requests that update a dependency file python Pull requests that update python code
#95 opened May 8, 2026 by dependabot Bot Loading…
Bump nbconvert from 7.17.0 to 7.17.1 in /dev dependencies Pull requests that update a dependency file python Pull requests that update python code
#94 opened Apr 21, 2026 by dependabot Bot Loading…
Add discrete-trait (DTA) model and treeflow_dta_hmc CLI
#93 opened Apr 14, 2026 by alexeid Collaborator Loading…
4 of 5 tasks
Bump pillow from 12.1.1 to 12.2.0 in /dev dependencies Pull requests that update a dependency file python Pull requests that update python code
#92 opened Apr 13, 2026 by dependabot Bot Loading…
Birth-death tree sampling with tf.function compatibility
#90 opened Apr 7, 2026 by christiaanjs Owner Loading…
3 tasks
4
Bump pygments from 2.19.2 to 2.20.0 in /dev dependencies Pull requests that update a dependency file python Pull requests that update python code
#84 opened Mar 30, 2026 by dependabot Bot Loading…
Bump jupyterlab from 4.4.1 to 4.4.8 dependencies Pull requests that update a dependency file python Pull requests that update python code
#81 opened Mar 26, 2026 by dependabot Bot Loading…
1
Bump requests from 2.32.5 to 2.33.0 in /dev dependencies Pull requests that update a dependency file python Pull requests that update python code
#80 opened Mar 26, 2026 by dependabot Bot Loading…
Bump tornado from 6.5.4 to 6.5.5 in /dev dependencies Pull requests that update a dependency file python Pull requests that update python code
#78 opened Mar 12, 2026 by dependabot Bot Loading…
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